nRc.2.0.1.g35501 (Romanomermis culicivorax)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 nRc.2.0.1.g35501 T235554_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HESX1
M03187_2.00 		Homo sapiens
NHTAATTRVH
DBYAATTADN		 SELEX
Jolma et al.(2013)
HESX1_1 		0.680 0.277
HESX1
M03188_2.00 		Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN		 SELEX
Jolma et al.(2013)
HESX1_2 		0.680 0.277
HESX1
M05227_2.00 		Homo sapiens
DYAATTRV
BYAATTRH		 SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX 		0.680 0.277
HESX1
M05228_2.00 		Homo sapiens
NYAATTRD
HYAATTRN		 SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX 		0.680 0.277
NOBOX
M09135_2.00 		Homo sapiens
HTAATTRVB
VBYAATTAD		 Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C 		0.640 0.383
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nRc.2.0.1.t35501-RA Homeodomain 13 49
nRc.2.0.1.t35501-RA Homeodomain 50 59

Links

Other Homeodomain family TFs
Other Romanomermis culicivorax TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ogr03859 Ophisaurus gracilis Ogr03859 I 0.763
ENSPSIG00000014030 Pelodiscus sinensis ENSPSIG00000014030 I 0.742
Cmyd_10001740 Chelonia mydas Cmyd_10001740 I 0.741
ENSP00000360811-D1 Bos grunniens ENSP00000360811-D1 I 0.732
HPLM_0000971301 Haemonchus placei HPLM_0000971301 I 0.732
LDEC008146 Leptinotarsa decemlineata LDEC008146 I 0.729
MCINX008871 Melitaea cinxia MCINX008871 I 0.719
HPBE_0000873701 Heligmosomoides bakeri HPBE_0000873701 I 0.718
ENSAMEG00000004942 Ailuropoda melanoleuca ENSAMEG00000004942 I 0.718
ASIM_0001230001 Anisakis simplex ASIM_0001230001 I 0.714
SSLN_0001460801 Schistocephalus solidus SSLN_0001460801 I 0.713
BGLB013824 Biomphalaria glabrata BGLB013824 I 0.710
Aan_R011917 Calypte anna Aan_R011917 I 0.709
TC000483 Tribolium castaneum TC000483 I 0.706
PRRX2 Cavia porcellus ENSCPOG00000021821 I 0.698
MCINX007054 Melitaea cinxia MCINX007054 I 0.697
MCOS_0000004601 Mesocestoides corti MCOS_0000004601 I 0.691
NBR_0000705501 Nippostrongylus brasiliensis NBR_0000705501 I 0.690
EFV55592 Trichinella spiralis EFV55592 I 0.688
GK22877 Drosophila willistoni FBgn0224839 I 0.688
CLEC007171 Cimex lectularius CLEC007171 I 0.687
ENSFCAG00000029037 Felis catus ENSFCAG00000029037 I 0.687
HMEL006244 Heliconius melpomene HMEL006244 I 0.685
TTRE_0000072001 Trichuris trichiura TTRE_0000072001 I 0.684
nRc.2.0.1.g34428 Romanomermis culicivorax nRc.2.0.1.g34428 I 0.681
BGLB004491 Biomphalaria glabrata BGLB004491 I 0.681
L892_g24303 Steinernema scapterisci L892_g24303 I 0.680
HESX1 Homo sapiens ENSG00000163666 D 0.680
CGI_10016653 Crassostrea gigas CGI_10016653 I 0.679
PEQ_0001388201 Parascaris equorum PEQ_0001388201 I 0.677
ALUE_0001497801 Ascaris lumbricoides ALUE_0001497801 I 0.677
tetur02g13510 Tetranychus urticae tetur02g13510 I 0.677
nLs.2.1.2.g05836 Litomosoides sigmodontis nLs.2.1.2.g05836 I 0.676
Myotis_brandtii_NOBOX_10026198 Myotis brandtii Myotis_brandtii_NOBOX_10026198 I 0.675
SPU_004366 Strongylocentrotus purpuratus SPU_004366 I 0.675
ENSMPUG00000007079 Mustela putorius furo ENSMPUG00000007079 I 0.675
Ogr09065 Ophisaurus gracilis Ogr09065 I 0.673
ACUA004306 Anopheles culicifacies ACUA004306 I 0.673
EVEC_0000357701 Enterobius vermicularis EVEC_0000357701 I 0.672
NOBOX Felis catus ENSFCAG00000004352 I 0.670
ENSP00000419457-D1 Bos grunniens ENSP00000419457-D1 I 0.670
ENSNLEG00000003406 Nomascus leucogenys ENSNLEG00000003406 I 0.670
ENSACAG00000002147 Anolis carolinensis ENSACAG00000002147 I 0.670
NOBOX Macaca mulatta ENSMMUG00000020609 I 0.670
ADAC008104 Anopheles darlingi ADAC008104 I 0.670
NOBOX Oryctolagus cuniculus ENSOCUG00000001027 I 0.670
ENSMMUP00000027138 Macaca fascicularis ENSMMUP00000027138 I 0.670
ENSCSAG00000007090 Chlorocebus sabaeus ENSCSAG00000007090 I 0.670
ENSPANG00000018829 Papio anubis ENSPANG00000018829 I 0.670
Gfo_R002825 Geospiza fortis Gfo_R002825 I 0.668
DICVIV_02647 Dictyocaulus viviparus DICVIV_02647 I 0.668
NOBOX Myotis lucifugus ENSMLUG00000004209 I 0.665
GF13343 Drosophila ananassae FBgn0090375 I 0.664
TCNE_0001081001 Toxocara canis TCNE_0001081001 I 0.664
L798_11440 Zootermopsis nevadensis L798_11440 I 0.664
ENSCSAVG00000000940 Ciona savignyi ENSCSAVG00000000940 I 0.662
TELCIR_07728 Teladorsagia circumcincta TELCIR_07728 I 0.661
meox1 Takifugu rubripes ENSTRUG00000005193 I 0.661
NOBOX Otolemur garnettii ENSOGAG00000010413 I 0.660
NOBOX Gorilla gorilla ENSGGOG00000022185 I 0.660
NOBOX Equus caballus ENSECAG00000003123 I 0.660
NOBOX Callithrix jacchus ENSCJAG00000009917 I 0.660
Pvit_13361 Pogona vitticeps Pvit_13361 I 0.659
ADAC001468 Anopheles darlingi ADAC001468 I 0.658
DLX4 Oryctolagus cuniculus ENSOCUG00000022067 I 0.657
TTAC_0000027101 Hydatigera taeniaeformis TTAC_0000027101 I 0.655
LHX6 Gorilla gorilla ENSGGOG00000008310 I 0.654
EFV57629 Trichinella spiralis EFV57629 I 0.653
D917_01051 Trichinella nativa D917_01051 I 0.653
ANCCAN_10593 Ancylostoma caninum ANCCAN_10593 I 0.653
Cflo_04174--XP_001120833.1_APIME Camponotus floridanus Cflo_04174--XP_001120833.1_APIME I 0.653
ENSSTOG00000026570 Ictidomys tridecemlineatus ENSSTOG00000026570 I 0.651
GF12207 Drosophila ananassae FBgn0089246 I 0.649
tetur14g02510 Tetranychus urticae tetur14g02510 I 0.649
YQE_10100 Dendroctonus ponderosae YQE_10100 I 0.648
SVUK_0001056001 Strongylus vulgaris SVUK_0001056001 I 0.647
T265_14002 Opisthorchis viverrini T265_14002 I 0.647
ENSMGAG00000013900 Meleagris gallopavo ENSMGAG00000013900 I 0.647
drgx Takifugu rubripes ENSTRUG00000013446 I 0.646
HelroG173001 Helobdella robusta HelroG173001 I 0.645
L798_06393 Zootermopsis nevadensis L798_06393 I 0.645
ENSLACG00000001487 Latimeria chalumnae ENSLACG00000001487 I 0.644
SNAPOd2T00016706001 Oikopleura dioica SNAPOd2T00016706001 I 0.644
DLX3 Bos taurus ENSBTAG00000017409 I 0.644
ENSTSYG00000014450 Tarsius syrichta ENSTSYG00000014450 I 0.643
CGI_10009720 Crassostrea gigas CGI_10009720 I 0.642
fgenesh2_pg.scaffold_23000163 Branchiostoma floridae fgenesh2_pg.scaffold_23000163 I 0.642
NOBOX Homo sapiens ENSG00000106410 D 0.640
HPLM_0001894101 Haemonchus placei HPLM_0001894101 I 0.640
NOBOX Pan troglodytes ENSPTRG00000019828 I 0.640
Cflo_02794--XP_001120105.1_APIME Camponotus floridanus Cflo_02794--XP_001120105.1_APIME I 0.640
PPAI007004 Phlebotomus papatasi PPAI007004 I 0.639
DLX4 Bos taurus ENSBTAG00000007353 I 0.637
ENSBTAP00000009672-D1 Bos grunniens ENSBTAP00000009672-D1 I 0.637
ALUE_0000848601 Ascaris lumbricoides ALUE_0000848601 I 0.637
ENSOARG00000005572 Ovis aries ENSOARG00000005572 I 0.636
DLX4 Myotis lucifugus ENSMLUG00000007268 I 0.635
NECAME_16530 Necator americanus NECAME_16530 I 0.634
T265_02852 Opisthorchis viverrini T265_02852 I 0.633
ANCCEY_04248 Ancylostoma ceylanicum ANCCEY_04248 N 0.633
BGIBMGA003233 Bombyx mori BGIBMGA003233 I 0.632
SINV13346 Solenopsis invicta SINV13346 I 0.631
ACUA026833 Anopheles culicifacies ACUA026833 I 0.629
AMAM000848 Anopheles maculatus AMAM000848 I 0.629
OESDEN_01216 Oesophagostomum dentatum OESDEN_01216 I 0.628
AFAF008499 Anopheles farauti AFAF008499 I 0.627
ENSMODG00000001675 Monodelphis domestica ENSMODG00000001675 I 0.624
NOBOX Canis familiaris ENSCAFG00000003500 I 0.623
ECANG7_01330 Echinococcus canadensis ECANG7_01330 I 0.611
SROB_0001564301 Schistosoma rodhaini SROB_0001564301 I 0.611
TTRE_0000266401 Trichuris trichiura TTRE_0000266401 N 0.609
TCLT_0000598301 Thelazia callipaeda TCLT_0000598301 N 0.609
SBAD_0000602401 Soboliphyme baturini SBAD_0000602401 I 0.608
EEL_0000220001 Elaeophora elaphi EEL_0000220001 I 0.608
HCOI01026600 Haemonchus contortus HCOI01026600 I 0.605
TELCIR_10796 Teladorsagia circumcincta TELCIR_10796 I 0.605
lhx8b Takifugu rubripes ENSTRUG00000017607 I 0.599