CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0000873701
(
Heligmosomoides bakeri
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
HPBE_0000873701
T234401_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH
DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.796
0.484
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.796
0.484
HESX1
M05227_2.00
Homo sapiens
DYAATTRV
BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.796
0.484
HESX1
M05228_2.00
Homo sapiens
NYAATTRD
HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.796
0.484
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB
VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.685
0.452
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0000873701-mRNA-1
Homeodomain
6
23
KRPRTTISAKSLDTLKQV
HPBE_0000873701-mRNA-1
Homeodomain
22
34
QVWFQNRRAKEKR
Links
Other
Homeodomain
family TFs
Other
Heligmosomoides bakeri
TFs
135 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSP00000360811-D1
Bos grunniens
ENSP00000360811-D1
I
0.839
PRRX2
Cavia porcellus
ENSCPOG00000021821
I
0.819
Aan_R011917
Calypte anna
Aan_R011917
I
0.812
HESX1
Homo sapiens
ENSG00000163666
D
0.796
MCINX008871
Melitaea cinxia
MCINX008871
I
0.786
Ogr03859
Ophisaurus gracilis
Ogr03859
I
0.776
ENSPSIG00000014030
Pelodiscus sinensis
ENSPSIG00000014030
I
0.770
MCINX007054
Melitaea cinxia
MCINX007054
I
0.763
LDEC008146
Leptinotarsa decemlineata
LDEC008146
I
0.761
LHX6
Gorilla gorilla
ENSGGOG00000008310
I
0.759
NBR_0000705501
Nippostrongylus brasiliensis
NBR_0000705501
I
0.757
CGI_10009720
Crassostrea gigas
CGI_10009720
I
0.750
tetur14g02510
Tetranychus urticae
tetur14g02510
I
0.750
EFV55592
Trichinella spiralis
EFV55592
I
0.748
ENSCSAVG00000000940
Ciona savignyi
ENSCSAVG00000000940
I
0.743
SPU_004366
Strongylocentrotus purpuratus
SPU_004366
I
0.742
BGLB013824
Biomphalaria glabrata
BGLB013824
I
0.741
TTRE_0000072001
Trichuris trichiura
TTRE_0000072001
I
0.739
ENSAMEG00000004942
Ailuropoda melanoleuca
ENSAMEG00000004942
I
0.737
DICVIV_02647
Dictyocaulus viviparus
DICVIV_02647
I
0.733
MCOS_0000004601
Mesocestoides corti
MCOS_0000004601
I
0.732
ENSP00000419457-D1
Bos grunniens
ENSP00000419457-D1
I
0.732
GK22877
Drosophila willistoni
FBgn0224839
I
0.732
SVUK_0001056001
Strongylus vulgaris
SVUK_0001056001
I
0.730
EVEC_0000357701
Enterobius vermicularis
EVEC_0000357701
I
0.727
HMEL006244
Heliconius melpomene
HMEL006244
I
0.724
OESDEN_01216
Oesophagostomum dentatum
OESDEN_01216
I
0.723
L892_g24303
Steinernema scapterisci
L892_g24303
I
0.722
nRc.2.0.1.g34428
Romanomermis culicivorax
nRc.2.0.1.g34428
I
0.722
Cmyd_10001740
Chelonia mydas
Cmyd_10001740
I
0.720
nRc.2.0.1.g35501
Romanomermis culicivorax
nRc.2.0.1.g35501
I
0.718
ENSACAG00000002147
Anolis carolinensis
ENSACAG00000002147
I
0.718
Ogr09065
Ophisaurus gracilis
Ogr09065
I
0.716
Myotis_brandtii_NOBOX_10026198
Myotis brandtii
Myotis_brandtii_NOBOX_10026198
I
0.715
ENSPANG00000018829
Papio anubis
ENSPANG00000018829
I
0.715
ENSMMUP00000027138
Macaca fascicularis
ENSMMUP00000027138
I
0.715
ENSNLEG00000003406
Nomascus leucogenys
ENSNLEG00000003406
I
0.715
ENSCSAG00000007090
Chlorocebus sabaeus
ENSCSAG00000007090
I
0.715
NOBOX
Oryctolagus cuniculus
ENSOCUG00000001027
I
0.715
NOBOX
Macaca mulatta
ENSMMUG00000020609
I
0.715
ENSMPUG00000007079
Mustela putorius furo
ENSMPUG00000007079
I
0.715
NOBOX
Felis catus
ENSFCAG00000004352
I
0.715
HPLM_0000971301
Haemonchus placei
HPLM_0000971301
I
0.714
ADAC008104
Anopheles darlingi
ADAC008104
I
0.712
GF12207
Drosophila ananassae
FBgn0089246
I
0.712
ENSFCAG00000029037
Felis catus
ENSFCAG00000029037
I
0.711
fgenesh2_pg.scaffold_23000163
Branchiostoma floridae
fgenesh2_pg.scaffold_23000163
I
0.709
HCOI01026600
Haemonchus contortus
HCOI01026600
I
0.708
TELCIR_10796
Teladorsagia circumcincta
TELCIR_10796
I
0.708
Pvit_13361
Pogona vitticeps
Pvit_13361
I
0.708
BGIBMGA003233
Bombyx mori
BGIBMGA003233
I
0.708
TCNE_0000653501
Toxocara canis
TCNE_0000653501
I
0.705
Cflo_02794--XP_001120105.1_APIME
Camponotus floridanus
Cflo_02794--XP_001120105.1_APIME
I
0.705
NOBOX
Callithrix jacchus
ENSCJAG00000009917
I
0.705
NOBOX
Myotis lucifugus
ENSMLUG00000004209
I
0.705
NOBOX
Gorilla gorilla
ENSGGOG00000022185
I
0.705
drgx
Takifugu rubripes
ENSTRUG00000013446
I
0.705
NOBOX
Otolemur garnettii
ENSOGAG00000010413
I
0.705
NOBOX
Equus caballus
ENSECAG00000003123
I
0.705
YQE_10100
Dendroctonus ponderosae
YQE_10100
I
0.704
PEQ_0001388201
Parascaris equorum
PEQ_0001388201
I
0.704
TC000483
Tribolium castaneum
TC000483
I
0.702
ADAC001468
Anopheles darlingi
ADAC001468
I
0.701
HelroG173001
Helobdella robusta
HelroG173001
I
0.700
ENSLACG00000001487
Latimeria chalumnae
ENSLACG00000001487
I
0.699
tetur02g13510
Tetranychus urticae
tetur02g13510
I
0.699
Cflo_04174--XP_001120833.1_APIME
Camponotus floridanus
Cflo_04174--XP_001120833.1_APIME
I
0.699
PPAI007004
Phlebotomus papatasi
PPAI007004
I
0.697
Gfo_R002825
Geospiza fortis
Gfo_R002825
I
0.695
ENSMGAG00000013900
Meleagris gallopavo
ENSMGAG00000013900
I
0.694
TTAC_0000027101
Hydatigera taeniaeformis
TTAC_0000027101
I
0.694
SSLN_0001460801
Schistocephalus solidus
SSLN_0001460801
I
0.694
ENSSTOG00000026570
Ictidomys tridecemlineatus
ENSSTOG00000026570
I
0.693
lhx8b
Takifugu rubripes
ENSTRUG00000017607
I
0.692
ENSTSYG00000014450
Tarsius syrichta
ENSTSYG00000014450
I
0.689
meox1
Takifugu rubripes
ENSTRUG00000005193
I
0.688
ENSMODG00000001675
Monodelphis domestica
ENSMODG00000001675
I
0.686
NOBOX
Pan troglodytes
ENSPTRG00000019828
I
0.685
SNAPOd2T00016706001
Oikopleura dioica
SNAPOd2T00016706001
I
0.685
NOBOX
Homo sapiens
ENSG00000106410
D
0.685
NOBOX
Canis familiaris
ENSCAFG00000003500
I
0.684
CLEC007171
Cimex lectularius
CLEC007171
I
0.678
nLs.2.1.2.g05836
Litomosoides sigmodontis
nLs.2.1.2.g05836
I
0.676
TELCIR_07728
Teladorsagia circumcincta
TELCIR_07728
I
0.676
T265_14002
Opisthorchis viverrini
T265_14002
I
0.674
ANCCAN_10593
Ancylostoma caninum
ANCCAN_10593
I
0.673
CGI_10016653
Crassostrea gigas
CGI_10016653
I
0.672
ACUA004306
Anopheles culicifacies
ACUA004306
I
0.669
ASIM_0001230001
Anisakis simplex
ASIM_0001230001
I
0.669
PEQ_0001069001
Parascaris equorum
PEQ_0001069001
I
0.669
ALUE_0001497801
Ascaris lumbricoides
ALUE_0001497801
I
0.668
ACUA026833
Anopheles culicifacies
ACUA026833
I
0.665
AMAM000848
Anopheles maculatus
AMAM000848
I
0.665
AFAF008499
Anopheles farauti
AFAF008499
I
0.664
HMEL016421
Heliconius melpomene
HMEL016421
I
0.662
BGLB009977
Biomphalaria glabrata
BGLB009977
I
0.662
Cmyd_10012400
Chelonia mydas
Cmyd_10012400
I
0.658
SVUK_0001599301
Strongylus vulgaris
SVUK_0001599301
I
0.658
GF13343
Drosophila ananassae
FBgn0090375
I
0.657
NECAME_16530
Necator americanus
NECAME_16530
I
0.656
BGLB014161
Biomphalaria glabrata
BGLB014161
I
0.656
HPLM_0001894101
Haemonchus placei
HPLM_0001894101
I
0.656
SINV13346
Solenopsis invicta
SINV13346
I
0.655
ALUE_0000848601
Ascaris lumbricoides
ALUE_0000848601
I
0.655
EEL_0000220001
Elaeophora elaphi
EEL_0000220001
I
0.652
DLX4
Oryctolagus cuniculus
ENSOCUG00000022067
I
0.650
NEMVEDRAFT_v1g198584
Nematostella vectensis
NEMVEDRAFT_v1g198584
I
0.650
EFV57629
Trichinella spiralis
EFV57629
I
0.646
D917_01051
Trichinella nativa
D917_01051
I
0.646
L798_11440
Zootermopsis nevadensis
L798_11440
I
0.643
L798_06393
Zootermopsis nevadensis
L798_06393
I
0.636
DLX3
Bos taurus
ENSBTAG00000017409
I
0.635
BGLB004491
Biomphalaria glabrata
BGLB004491
I
0.635
DLX4
Bos taurus
ENSBTAG00000007353
I
0.630
ENSBTAP00000009672-D1
Bos grunniens
ENSBTAP00000009672-D1
I
0.630
ENSOARG00000005572
Ovis aries
ENSOARG00000005572
I
0.629
DLX4
Myotis lucifugus
ENSMLUG00000007268
I
0.628
SROB_0001564301
Schistosoma rodhaini
SROB_0001564301
I
0.626
estExt_fgenesh1_pg.C_60239
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_60239
I
0.620
COCC4DRAFT_69376
Bipolaris maydis
COCC4DRAFT_69376
I
0.620
T265_02852
Opisthorchis viverrini
T265_02852
I
0.619
TCNE_0001081001
Toxocara canis
TCNE_0001081001
I
0.619
ENSBTAP00000049813-D5
Bos grunniens
ENSBTAP00000049813-D5
I
0.618
L892_g9682
Steinernema scapterisci
L892_g9682
I
0.617
ENSTSYG00000000516
Tarsius syrichta
ENSTSYG00000000516
I
0.614
L798_10521
Zootermopsis nevadensis
L798_10521
N
0.613
CpipJ_CPIJ006790
Culex pipiens
CpipJ_CPIJ006790
N
0.606
CPIJ006790
Culex quinquefasciatus
CPIJ006790
N
0.606
Eucgr.H02817
Eucalyptus grandis
Eucgr.H02817
I
0.606
TTAC_0001021101
Hydatigera taeniaeformis
TTAC_0001021101
N
0.604
HNAJ_0000529701
Hymenolepis nana
HNAJ_0000529701
N
0.603
HDID_0000333701
Hymenolepis diminuta
HDID_0000333701
N
0.602
BGLB009341
Biomphalaria glabrata
BGLB009341
I
0.600
PPA27300
Pristionchus pacificus
PPA27300
N
0.600
Cmyd_10006547
Chelonia mydas
Cmyd_10006547
N
0.599