CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCC4DRAFT_69376
(
Bipolaris maydis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
COCC4DRAFT_69376
T206039_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH
DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.626
0.268
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.626
0.268
HESX1
M05227_2.00
Homo sapiens
DYAATTRV
BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.626
0.268
HESX1
M05228_2.00
Homo sapiens
NYAATTRD
HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.626
0.268
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENI08746
Homeodomain
22
48
VKPRLTKDQHDILEQHFLAQHKPSTNN
ENI08746
Homeodomain
46
59
TNNWFQNRRAKVKQ
Links
Other
Homeodomain
family TFs
Other
Bipolaris maydis
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_60239
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_60239
I
0.867
SNOG_06729
Stagonospora nodorum
SNOG_06729
N
0.793
SNOG_06729
Phaeosphaeria nodorum
SNOG_06729
N
0.783
MCINX007054
Melitaea cinxia
MCINX007054
I
0.665
Eucgr.H02817
Eucalyptus grandis
Eucgr.H02817
I
0.640
BGIBMGA003233
Bombyx mori
BGIBMGA003233
I
0.634
NBR_0000705501
Nippostrongylus brasiliensis
NBR_0000705501
I
0.633
MCINX008871
Melitaea cinxia
MCINX008871
I
0.633
Aan_R011917
Calypte anna
Aan_R011917
I
0.626
PRRX2
Cavia porcellus
ENSCPOG00000021821
I
0.626
HESX1
Homo sapiens
ENSG00000163666
D
0.626
ENSP00000360811-D1
Bos grunniens
ENSP00000360811-D1
I
0.622
HPBE_0000873701
Heligmosomoides bakeri
HPBE_0000873701
I
0.620
ONIVA08G19230
Oryza nivara
ONIVA08G19230
N
0.610
OPUNC09G10660
Oryza punctata
OPUNC09G10660
I
0.606
OMERI08G14040
Oryza meridionalis
OMERI08G14040
I
0.606
TRIUR3_27997
Triticum urartu
TRIUR3_27997
N
0.605
PGSC0003DMG400021423
Solanum tuberosum
PGSC0003DMG400021423
I
0.600