CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g28015
(
Steinernema carpocapsae
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
L596_g28015
T237858_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g28015.t1
Paired box
2
127
GQGRVNQLGGVFINGRPLPQQIRLKIIEMANNGVKPCHISRQLRVSHGCVSKILYRYAETGSVTPGQIGGSPRSKKMIDTVEKQICDIKMSNPTISPNEVRHTLIRNGVCSRSTAPTVSAIARVFR
L596_g28015.t1
Homeodomain
174
230
RRNRTSFTSEQLSTLESAFNANTYPDAVQREQIAKATGLSEAKIQVWFSNRRARYRK
Links
Other
Homeodomain,Paired box
family TFs
Other
Steinernema carpocapsae
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g7001
Steinernema scapterisci
L892_g7001
N
0.934
L893_g19326
Steinernema glaseri
L893_g19326
N
0.918
L889_g18441
Steinernema feltiae
L889_g18441
N
0.918
L898_g8114
Steinernema monticolum
L898_g8114
N
0.828
nLs.2.1.2.g02365
Litomosoides sigmodontis
nLs.2.1.2.g02365
N
0.731
BTMF_0000840501
Brugia timori
BTMF_0000840501
N
0.725
LOAG_16736
Loa loa
LOAG_16736
N
0.725
Bm10054
Brugia malayi
Bm10054
N
0.725
nDi.2.2.2.g00519
Dirofilaria immitis
nDi.2.2.2.g00519
N
0.720
WUBG_00484
Wuchereria bancrofti
WUBG_00484
N
0.720
nAv.1.0.1.g05397
Acanthocheilonema viteae
nAv.1.0.1.g05397
N
0.714
HCOI01507400
Haemonchus contortus
HCOI01507400
N
0.709
HPLM_0000710501
Haemonchus placei
HPLM_0000710501
N
0.709
ASU_06308
Ascaris suum
ASU_06308
N
0.708
PAX7
Choloepus hoffmanni
ENSCHOG00000005130
I
0.702
ENSVPAG00000012251
Vicugna pacos
ENSVPAG00000012251
I
0.702