Cmyd_10009510 (Chelonia mydas)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00157 (Pou) 		IPR001356
IPR000327 		Cmyd_10009510 T238918_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
POU4F2
M03310_2.00 		Homo sapiens
BTMATTAAWTATKCAN
NTGMATAWTTAATKAV		 SELEX
Jolma et al.(2013)
POU4F2_1 		1.000 1.000
POU4F2
M03311_2.00 		Homo sapiens
BTMATTAATTATKCAN
NTGMATAATTAATKAV		 SELEX
Jolma et al.(2013)
POU4F2_2 		1.000 1.000
POU4F2
M10839_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BRN3B_Q2 		1.000 1.000
POU4F2
M10840_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$POU4F2_02 		1.000 1.000
For this family, TFs with SR scores > 0.993 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10009510 POU 49 123
Cmyd_10009510 Homeodomain 142 198

Links

Other Homeodomain,POU family TFs
Other Chelonia mydas TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POU4F2 Pan troglodytes ENSPTRG00000016492 I 1.000
POU4F2 Pteropus vampyrus ENSPVAG00000011688 I 1.000
Pou4f2 Rattus norvegicus ENSRNOG00000012167 I 1.000
POU4F2 Sorex araneus ENSSARG00000007463 I 1.000
ENSPSIG00000001736 Pelodiscus sinensis ENSPSIG00000001736 I 1.000
ENSPPYG00000015107 Pongo abelii ENSPPYG00000015107 I 1.000
POU4F2 Otolemur garnettii ENSOGAG00000028626 I 1.000
POU4F2 Ochotona princeps ENSOPRG00000011220 I 1.000
ENSPANG00000006551 Papio anubis ENSPANG00000006551 I 1.000
POU4F2 Procavia capensis ENSPCAG00000002636 I 1.000
ENSSHAG00000013709 Sarcophilus harrisii ENSSHAG00000013709 I 1.000
ENSSSCG00000009034 Sus scrofa ENSSSCG00000009034 I 1.000
Myotis_brandtii_POU4F2_10016901 Myotis brandtii Myotis_brandtii_POU4F2_10016901 I 1.000
Ogr03813 Ophisaurus gracilis Ogr03813 I 1.000
Pvit_02490 Pogona vitticeps Pvit_02490 I 1.000
pou4f2 Xenopus tropicalis XB-GENE-854899 I 1.000
ENSP00000281321 Macaca fascicularis ENSP00000281321 I 1.000
ENSP00000281321-D1 Bos grunniens ENSP00000281321-D1 I 1.000
POU4F2 Sus scrofa ENSSSCG00000026015 I 1.000
ENSSTOG00000021113 Ictidomys tridecemlineatus ENSSTOG00000021113 I 1.000
POU4F2 Vicugna pacos ENSVPAG00000006925 I 1.000
Alligator_sinensis_CCG006380.1 Alligator sinensis Alligator_sinensis_CCG006380.1 I 1.000
POU4F2 Ornithorhynchus anatinus ENSOANG00000006897 I 1.000
ENSNLEG00000005619 Nomascus leucogenys ENSNLEG00000005619 I 1.000
Pou4f2 Dipodomys ordii ENSDORG00000004448 I 1.000
POU4F2 Equus caballus ENSECAG00000020754 I 1.000
POU4F2 Felis catus ENSFCAG00000003049 I 1.000
POU4F2 Homo sapiens ENSG00000151615 D 1.000
POU4F2 Dasypus novemcinctus ENSDNOG00000013134 I 1.000
ENSCSAG00000003411 Chlorocebus sabaeus ENSCSAG00000003411 I 1.000
POU4F2 Bos taurus ENSBTAG00000005648 I 1.000
POU4F2 Canis familiaris ENSCAFG00000007756 I 1.000
POU4F2 Callithrix jacchus ENSCJAG00000002462 I 1.000
POU4F2 Cavia porcellus ENSCPOG00000013770 I 1.000
POU4F2 Gorilla gorilla ENSGGOG00000001836 I 1.000
ENSGMOG00000000453 Gadus morhua ENSGMOG00000000453 I 1.000
POU4F2 Macaca mulatta ENSMMUG00000023440 I 1.000
POU4F2 Monodelphis domestica ENSMODG00000000557 I 1.000
ENSMPUG00000006963 Mustela putorius furo ENSMPUG00000006963 I 1.000
Pou4f2 Mus musculus ENSMUSG00000031688 I 1.000
POU4F2 Myotis lucifugus ENSMLUG00000015174 I 1.000
ENSMICG00000000575 Microcebus murinus ENSMICG00000000575 I 1.000
ENSLACG00000005883 Latimeria chalumnae ENSLACG00000005883 I 1.000
POU4F2 Loxodonta africana ENSLAFG00000001505 I 1.000
ENSLOCG00000008825 Lepisosteus oculatus ENSLOCG00000008825 I 1.000
ENSMEUG00000012973 Macropus eugenii ENSMEUG00000012973 I 1.000
ENSAMEG00000016679 Ailuropoda melanoleuca ENSAMEG00000016679 I 1.000