CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra013409
(
Brassica rapa
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
Bra013409
T239848_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra013409.1-P
HSF
4
97
FHVAIYEIVDDPSLDSTISWSKSNKSFIIWNPKELFTKKILKRFFCCNLSQFITELDTYGFVRIEGSDEQLEFGHKQYFVRGKPELLKKMRLQA
Bra013409.1-P
HSF
149
242
FYTGIYKVVDDPSLDSIISWSESNKSFVIWDPKELVEKKILRRFFRNKLSHFIKDLKSHGFVRIKGSDEHLEFGHEQYFVRGKPELMIKLRRKV
Links
Other
HSF
family TFs
Other
Brassica rapa
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo1g021700
Brassica oleracea
Bo1g021700
I
0.367
Bostr.30275s0196
Boechera stricta
Bostr.30275s0196
N
0.358
scaffold_702719.1
Arabidopsis lyrata
scaffold_702719.1
N
0.354
Cagra.4306s0005
Capsella grandiflora
Cagra.4306s0005
N
0.348
Carubv10007111m.g
Capsella rubella
Carubv10007111m.g
N
0.347
Al_scaffold_0007_2288
Arabidopsis lyrata
Al_scaffold_0007_2288
N
0.340
AT4G18870
Arabidopsis thaliana
AT4G18870
N
0.332
Bra013406
Brassica rapa
Bra013406
I
0.331
Bra030021
Brassica rapa
Bra030021
I
0.326