Thaps22454 (Thalassiosira pseudonana)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Thaps22454 T242217_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSF1
M00060_2.00
Saccharomyces cerevisiae
NNNTTCNNN

NNNGAANNN
PBM
Badis et al.(2008)
HSF1_4530
0.329 0.416
HSF1
M07489_2.00
Saccharomyces cerevisiae
HVTTCCAT

ATGGAABD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1
0.329 0.416
HSF1
M08577_2.00
Saccharomyces cerevisiae
TTCTAGAA

TTCTAGAA
Misc
DeBoer et al.(2011)
YGL073W_1461
0.329 0.416
HSF1
M08578_2.00
Saccharomyces cerevisiae
GAANNNNNWRGAA

TTCYWNNNNNTTC
Misc
DeBoer et al.(2011)
YGL073W_411
0.329 0.416
HSF1
M08579_2.00
Saccharomyces cerevisiae
HVTTCCAT

ATGGAABD
Misc
DeBoer et al.(2011)
YGL073W_476
0.329 0.416
HSF1
M08580_2.00
Saccharomyces cerevisiae
RGAABNTTCTRGAA

TTCYAGAANVTTCY
Misc
DeBoer et al.(2011)
YGL073W_615
0.329 0.416
HSF1
M10874_2.00
Saccharomyces cerevisiae
RGAANRGAANRGAAN

NTTCYNTTCYNTTCY
Transfac
Matys et al.(2006)
F$HSF_02
0.329 0.416
HSF1
M10875_2.00
Saccharomyces cerevisiae
RGAANNTTCYNTTCY

RGAANRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_03
0.329 0.416
HSF1
M10876_2.00
Saccharomyces cerevisiae
RGAANNTTCYRGAAN

NTTCYRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_04
0.329 0.416
HSF1
M10877_2.00
Saccharomyces cerevisiae
NTTCYNTTCYRGAAN

NTTCYRGAANRGAAN
Transfac
Matys et al.(2006)
F$HSF_05
0.329 0.416
HSF1
M10878_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$HSF_Q6
0.329 0.416
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps22454 HSF 111 206

Links

Other HSF family TFs
Other Thalassiosira pseudonana TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HSF1 Saccharomyces cerevisiae YGL073W D 0.329
8607_YGL073W Saccharomyces paradoxus 8607_YGL073W I 0.329
ZBAI_09737 Zygosaccharomyces bailii ZBAI_09737 I 0.330
ZBAI_03930 Zygosaccharomyces bailii ZBAI_03930 I 0.330
Phatr3_J49594 Phaeodactylum tricornutum Phatr3_J49594 I 0.393
Thaps264346 Thalassiosira pseudonana Thaps264346 I 0.336
estExt_Genewise1Plus.C_91152 Fragilariopsis cylindrus estExt_Genewise1Plus.C_91152 I 0.414
ZYRO0G08734g Zygosaccharomyces rouxii ZYRO0G08734g I 0.326
TDEL_0E05170 Torulaspora delbrueckii TDEL_0E05170 I 0.331
7859_YGL073W Saccharomyces mikatae 7859_YGL073W I 0.329
SKUD_205711 Saccharomyces kudriavzevii SKUD_205711 I 0.347
Phatr3_J34415 Phaeodactylum tricornutum Phatr3_J34415 I 0.329
SU7_1143 Saccharomyces arboricola SU7_1143 I 0.332
Thaps262668 Thalassiosira pseudonana Thaps262668 N 0.319
Thaps22932 Thalassiosira pseudonana Thaps22932 N 0.339
Thaps6958 Thalassiosira pseudonana Thaps6958 N 0.370
Thaps23801 Thalassiosira pseudonana Thaps23801 N 0.363
Thaps263978 Thalassiosira pseudonana Thaps263978 N 0.335
e_gw1.2.1757.1 Fragilariopsis cylindrus e_gw1.2.1757.1 N 0.326
gw1.6.996.1 Fragilariopsis cylindrus gw1.6.996.1 N 0.325
gw1.35.99.1 Fragilariopsis cylindrus gw1.35.99.1 N 0.321
gw1.27.181.1 Fragilariopsis cylindrus gw1.27.181.1 N 0.344
gw1.26.222.1 Fragilariopsis cylindrus gw1.26.222.1 N 0.390
gw1.2.1206.1 Fragilariopsis cylindrus gw1.2.1206.1 N 0.361
gw1.1.2017.1 Fragilariopsis cylindrus gw1.1.2017.1 N 0.319
estExt_Genewise1.C_11901 Fragilariopsis cylindrus estExt_Genewise1.C_11901 N 0.326
estExt_fgenesh2_pg.C_40667 Fragilariopsis cylindrus estExt_fgenesh2_pg.C_40667 N 0.399
e_gw1.94.63.1 Fragilariopsis cylindrus e_gw1.94.63.1 N 0.326
e_gw1.5.1185.1 Fragilariopsis cylindrus e_gw1.5.1185.1 N 0.319
e_gw1.27.180.1 Fragilariopsis cylindrus e_gw1.27.180.1 N 0.323
e_gw1.2.349.1 Fragilariopsis cylindrus e_gw1.2.349.1 N 0.368
Thaps21513 Thalassiosira pseudonana Thaps21513 N 0.349
Thaps12066 Thalassiosira pseudonana Thaps12066 N 0.337
Thaps10613 Thalassiosira pseudonana Thaps10613 N 0.375
Phatr3_J48361 Phaeodactylum tricornutum Phatr3_J48361 N 0.383
Phatr3_J45392 Phaeodactylum tricornutum Phatr3_J45392 N 0.335
Phatr3_J44917 Phaeodactylum tricornutum Phatr3_J44917 N 0.355
Phatr3_J44684 Phaeodactylum tricornutum Phatr3_J44684 N 0.411
HSF1 Phaeodactylum tricornutum Phatr3_J44099 N 0.357
Phatr3_J43364 Phaeodactylum tricornutum Phatr3_J43364 N 0.342
Phatr3_J39786 Phaeodactylum tricornutum Phatr3_J39786 N 0.328
Phatr3_J39785 Phaeodactylum tricornutum Phatr3_J39785 N 0.363
Phatr3_EG01933 Phaeodactylum tricornutum Phatr3_EG01933 N 0.384
Phatr3_EG00672 Phaeodactylum tricornutum Phatr3_EG00672 N 0.392
Phatr3_EG00322 Phaeodactylum tricornutum Phatr3_EG00322 N 0.405
Phatr3_J48394 Phaeodactylum tricornutum Phatr3_J48394 N 0.384
Phatr3_J48558 Phaeodactylum tricornutum Phatr3_J48558 N 0.403
Phatr3_J48572 Phaeodactylum tricornutum Phatr3_J48572 N 0.357
Phatr3_J43363 Phaeodactylum tricornutum Phatr3_J43363 N 0.336
Phatr3_Jdraft1650 Phaeodactylum tricornutum Phatr3_Jdraft1650 N 0.438
HSF2 Phaeodactylum tricornutum Phatr3_J55070 N 0.359
Phatr3_J49620 Phaeodactylum tricornutum Phatr3_J49620 N 0.391
Phatr3_J49596 Phaeodactylum tricornutum Phatr3_J49596 N 0.440
Phatr3_J49567 Phaeodactylum tricornutum Phatr3_J49567 N 0.394
Phatr3_J49566 Phaeodactylum tricornutum Phatr3_J49566 N 0.384
Phatr3_J49557 Phaeodactylum tricornutum Phatr3_J49557 N 0.417
Phatr3_J49170 Phaeodactylum tricornutum Phatr3_J49170 N 0.335
Phatr3_J48702 Phaeodactylum tricornutum Phatr3_J48702 N 0.372
Phatr3_J48667 Phaeodactylum tricornutum Phatr3_J48667 N 0.350
Phatr3_EG00212 Phaeodactylum tricornutum Phatr3_EG00212 N 0.368