fgenesh2_pg.scaffold_142000054 (Branchiostoma floridae)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 fgenesh2_pg.scaffold_142000054 T242883_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF5
M05519_2.00 		Homo sapiens
NRCRTTCTAGAACGYN
NRCGTTCTAGAAYGYN		 SELEX
Yin et al.(2017)
HSF5_eDBD_HT-SELEX_1 		0.323 0.462
HSF5
M05520_2.00 		Homo sapiens
YVGAAYRYNNNNNNNNNBHACRTTCBR
YVGAAYGTDVNNNNNNNNNRYRTTCBR		 SELEX
Yin et al.(2017)
HSF5_eDBD_HT-SELEX_2 		0.323 0.462
HSF5
M05521_2.00 		Homo sapiens
AACRTTCTAGAAYGTT
AACRTTCTAGAAYGTT		 SELEX
Yin et al.(2017)
HSF5_eDBD_Methyl-HT-SELEX_1 		0.323 0.462
HSF5
M05522_2.00 		Homo sapiens
YRGAAYDYNVNNNNNNNBAACRTTCYR
YRGAAYGTTVNNNNNNNBNRHRTTCYR		 SELEX
Yin et al.(2017)
HSF5_eDBD_Methyl-HT-SELEX_2 		0.323 0.462
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_142000054 HSF 85 184

Links

Other HSF family TFs
Other Branchiostoma floridae TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HSF5 Echinops telfairi ENSETEG00000014190 I 0.334
HSF5 Gorilla gorilla ENSGGOG00000013788 I 0.327
HSF5 Cavia porcellus ENSCPOG00000003431 I 0.325
HSF5 Pan troglodytes ENSPTRG00000009453 I 0.323
HSF5 Homo sapiens ENSG00000176160 D 0.323
ENSPPYG00000008231 Pongo abelii ENSPPYG00000008231 I 0.319
ENSSTOG00000020272 Ictidomys tridecemlineatus ENSSTOG00000020272 I 0.319
HSF5 Sus scrofa ENSSSCG00000017641 I 0.319
HSF5 Procavia capensis ENSPCAG00000011323 I 0.319
ENSMEUG00000007286 Macropus eugenii ENSMEUG00000007286 I 0.319
HSF5 Dasypus novemcinctus ENSDNOG00000014871 I 0.319
HSF5 Canis familiaris ENSCAFG00000017528 I 0.319
HSF5 Bos taurus ENSBTAG00000001166 I 0.319
Hsf5 Mus musculus ENSMUSG00000070345 I 0.319