irf1a (Danio rerio)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSDARG00000043492 T244015_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf2
M00805_2.00 		Mus musculus
NDWNHGAAAV
BTTTCDNWHN		 PBM
Weirauch et al.(2013)
pTH2835 		0.724 0.724
Irf2
M09245_2.00 		Mus musculus
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B 		0.724 0.724
IRF2
M05545_2.00 		Homo sapiens
NGAAAVYGAAAS
STTTCRBTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX 		0.705 0.705
IRF2
M02691_2.00 		Homo sapiens
SGAAAGYGAAASYNWWHH
DDWWNRSTTTCRCTTTCS		 SELEX
Mathelier et al.(2014)
MA0051.1 		0.705 0.705
IRF2
M09237_2.00 		Homo sapiens
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A 		0.705 0.705
IRF2
M09596_2.00 		Homo sapiens
NRAAVNRRAASB
VSTTYYNBTTYN		 Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985 		0.705 0.705
IRF2
M10892_2.00 		Homo sapiens
GAAAAGYGAAASY
RSTTTCRCTTTTC		 Transfac
Matys et al.(2006)
V$IRF2_01 		0.705 0.705
IRF2
M10893_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF2_Q6 		0.705 0.705
IRF2
M05546_2.00 		Homo sapiens
NGAAASYGAAAS
STTTCRSTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000070128 IRF 7 112

Links

Other IRF family TFs
Other Danio rerio TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSLOCG00000009136 Lepisosteus oculatus ENSLOCG00000009136 I 0.848
irf1a Tetraodon nigroviridis ENSTNIG00000004659 N 0.829
ENSTRUG00000000250 Takifugu rubripes ENSTRUG00000000250 N 0.810
ENSGMOG00000005780 Gadus morhua ENSGMOG00000005780 N 0.810
ENSONIG00000017180 Oreochromis niloticus ENSONIG00000017180 N 0.800
ENSPFOG00000015008 Poecilia formosa ENSPFOG00000015008 N 0.781
ENSORLG00000011716 Oryzias latipes ENSORLG00000011716 N 0.781
ENSGACG00000016299 Gasterosteus aculeatus ENSGACG00000016299 N 0.771
ENSXMAG00000017512 Xiphophorus maculatus ENSXMAG00000017512 N 0.771
ENSAMXG00000009163 Astyanax mexicanus ENSAMXG00000009163 I 0.724
Irf2 Mus musculus ENSMUSG00000031627 D 0.724
IRF2 Meleagris gallopavo ENSMGAG00000006359 I 0.714
Brh_R001640 Buceros rhinoceros Brh_R001640 I 0.714
ENSLOCG00000013738 Lepisosteus oculatus ENSLOCG00000013738 I 0.714
IRF2 Taeniopygia guttata ENSTGUG00000006662 I 0.714
ENSOARG00000007443 Ovis aries ENSOARG00000007443 I 0.714
Irf2 Rattus norvegicus ENSRNOG00000009824 I 0.714
ENSAMXG00000005897 Astyanax mexicanus ENSAMXG00000005897 I 0.714
IRF2 Equus caballus ENSECAG00000007508 I 0.714
IRF2 Bos taurus ENSBTAG00000010002 I 0.714
Gfo_R010481 Geospiza fortis Gfo_R010481 I 0.714
ENSFALG00000011727 Ficedula albicollis ENSFALG00000011727 I 0.714
ENSBTAP00000013193-D1 Bos grunniens ENSBTAP00000013193-D1 I 0.714
irf2.S Xenopus laevis XB-GENE-17339545 I 0.705
irf2 Xenopus tropicalis XB-GENE-942910 I 0.705
IRF2 Sus scrofa ENSSSCG00000015782 I 0.705
ENSSHAG00000002124 Sarcophilus harrisii ENSSHAG00000002124 I 0.705
Tal_R005926 Tyto alba Tal_R005926 I 0.705
Myotis_brandtii_IRF2_10027054 Myotis brandtii Myotis_brandtii_IRF2_10027054 I 0.705
Afo_R013359 Aptenodytes forsteri Afo_R013359 I 0.705
ENSP00000377218 Macaca fascicularis ENSP00000377218 I 0.705
Ogr17358 Ophisaurus gracilis Ogr17358 I 0.705
IRF2 Tursiops truncatus ENSTTRG00000009391 I 0.705
ENSNLEG00000010848 Nomascus leucogenys ENSNLEG00000010848 I 0.705
IRF2 Homo sapiens ENSG00000168310 D 0.705
IRF2 Gorilla gorilla ENSGGOG00000016559 I 0.705
IRF2 Loxodonta africana ENSLAFG00000000088 I 0.705
IRF2 Felis catus ENSFCAG00000030144 I 0.705
irf2 Danio rerio ENSDARG00000040465 I 0.705
IRF2 Canis familiaris ENSCAFG00000007761 I 0.705
IRF2 Callithrix jacchus ENSCJAG00000005731 I 0.705
ENSCSAG00000003010 Chlorocebus sabaeus ENSCSAG00000003010 I 0.705
IRF2 Microcebus murinus ENSMICG00000015506 I 0.705
IRF2 Myotis lucifugus ENSMLUG00000014246 I 0.705
IRF2 Oryctolagus cuniculus ENSOCUG00000009229 I 0.705
IRF2 Otolemur garnettii ENSOGAG00000010966 I 0.705
IRF2 Pan troglodytes ENSPTRG00000016639 I 0.705
ENSAMEG00000008380 Ailuropoda melanoleuca ENSAMEG00000008380 I 0.705
ENSMPUG00000011075 Mustela putorius furo ENSMPUG00000011075 I 0.705
IRF2 Macaca mulatta ENSMMUG00000015087 I 0.705
IRF2 Monodelphis domestica ENSMODG00000004393 I 0.705
IRF2 Pteropus vampyrus ENSPVAG00000007078 I 0.705