ENSFALG00000000504 (Ficedula albicollis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSFALG00000000504 T244060_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.965 0.965
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.947 0.947
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		0.930 0.930
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		0.930 0.930
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		0.930 0.930
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		0.930 0.930
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		0.930 0.930
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.912 0.912
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.825 0.825
Irf5
M00177_2.00 		Mus musculus
NNNHGADASH
DSTHTCDNNN		 PBM
Badis et al.(2009)
Irf5_3874 		0.737 0.737
IRF5
M02256_2.00 		Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN		 PBM
Weirauch et al.(2014)
pTH9272 		0.737 0.737
IRF5
M03332_2.00 		Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR		 SELEX
Jolma et al.(2013)
IRF5_1 		0.737 0.737
IRF5
M03333_2.00 		Homo sapiens
HACCGAAACYV
BRGTTTCGGTD		 SELEX
Jolma et al.(2013)
IRF5_2 		0.737 0.737
IRF5
M05535_2.00 		Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX 		0.737 0.737
IRF5
M05537_2.00 		Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX 		0.737 0.737
IRF5
M10884_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF5_Q3 		0.737 0.737
IRF5
M05536_2.00 		Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN		 SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX 		0.737 0.737
IRF5
M05538_2.00 		Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN		 SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX 		0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFALP00000000519 IRF 1 57

Links

Other IRF family TFs
Other Ficedula albicollis TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
IRF6 Anolis carolinensis ENSACAG00000005931 I 0.965
Ogr12956 Ophisaurus gracilis Ogr12956 I 0.965
ENSMEUG00000014941 Macropus eugenii ENSMEUG00000014941 I 0.947
IRF6 Monodelphis domestica ENSMODG00000002539 I 0.947
Pvit_15428 Pogona vitticeps Pvit_15428 I 0.947
IRF6 Ornithorhynchus anatinus ENSOANG00000013718 I 0.947
irf6 Danio rerio ENSDARG00000101986 I 0.930
irf6.2.L Xenopus laevis XB-GENE-5910427 I 0.930
irf6.2 Xenopus tropicalis XB-GENE-5910331 D 0.912
irf5.L Xenopus laevis XB-GENE-998629 D 0.825
Pvit_14327 Pogona vitticeps Pvit_14327 I 0.825
ENSLOCG00000015563 Lepisosteus oculatus ENSLOCG00000015563 I 0.825
ENSAPLG00000006203 Anas platyrhynchos ENSAPLG00000006203 I 0.772
ENSLACG00000005750 Latimeria chalumnae ENSLACG00000005750 I 0.754
ENSMEUG00000002435 Macropus eugenii ENSMEUG00000002435 I 0.754
IRF5 Erinaceus europaeus ENSEEUG00000014653 I 0.754
Irf5 Rattus norvegicus ENSRNOG00000007437 I 0.737
IRF5 Ochotona princeps ENSOPRG00000006148 I 0.737
ENSSTOG00000004858 Ictidomys tridecemlineatus ENSSTOG00000004858 I 0.737
IRF5 Sus scrofa ENSSSCG00000016573 I 0.737
IRF5 Microcebus murinus ENSMICG00000000138 I 0.737
IRF5 Dasypus novemcinctus ENSDNOG00000013370 I 0.737
IRF5 Cavia porcellus ENSCPOG00000000246 I 0.737
IRF5 Callithrix jacchus ENSCJAG00000018061 I 0.737
IRF5 Felis catus ENSFCAG00000000956 I 0.737
IRF5 Oryctolagus cuniculus ENSOCUG00000010101 D 0.737
Irf5 Mus musculus ENSMUSG00000029771 D 0.737
ENSMPUG00000006034 Mustela putorius furo ENSMPUG00000006034 I 0.737
IRF5 Loxodonta africana ENSLAFG00000021568 I 0.737
ENSAMEG00000005109 Ailuropoda melanoleuca ENSAMEG00000005109 I 0.737
IRF5 Homo sapiens ENSG00000128604 D 0.702