orange1.1g029970m.g (Citrus sinensis)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 orange1.1g029970m.g T247155_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g029970m LOB 3 87

Links

Other LOB family TFs
Other Citrus sinensis TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10029274m.g Citrus clementina Ciclev10029274m.g N 0.894
evm.TU.supercontig_106.63 Carica papaya evm.TU.supercontig_106.63 N 0.788
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.776
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N 0.776
LBD38 Arabidopsis thaliana AT3G49940 N 0.776
29661.m000902 Ricinus communis 29661.m000902 N 0.776
28152.m000905 Ricinus communis 28152.m000905 N 0.776
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.776
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.765
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.765
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.765
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.765
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.765
TCM_000766 Theobroma cacao TCM_000766 N 0.765
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.765
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.765
cassava9459.m1 Manihot esculenta cassava9459.m1 N 0.765
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.765
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.765
Ca_09342 Cicer arietinum Ca_09342 N 0.765
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N 0.765
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.765
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.765
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N 0.753
Cla014228 Citrullus lanatus Cla014228 N 0.753
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N 0.753
Cucsa.103050 Cucumis sativus Cucsa.103050 N 0.753
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.753
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.753
Bra012164 Brassica rapa Bra012164 N 0.753
POPTR_0001s30280 Populus trichocarpa POPTR_0001s30280 N 0.753
Bo7g063630 Brassica oleracea Bo7g063630 N 0.753
Bo7g099150 Brassica oleracea Bo7g099150 N 0.753
PGSC0003DMG400025752 Solanum tuberosum PGSC0003DMG400025752 N 0.753
Bostr.0568s0168 Boechera stricta Bostr.0568s0168 N 0.741
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N 0.741
Cagra.0342s0030 Capsella grandiflora Cagra.0342s0030 N 0.741
Bra037847 Brassica rapa Bra037847 N 0.741
Bra031833 Brassica rapa Bra031833 N 0.741
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.741
Bra012913 Brassica rapa Bra012913 N 0.741
Thhalv10004811m.g Eutrema salsugineum Thhalv10004811m.g N 0.741
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.741
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N 0.741
Carubv10027507m.g Capsella rubella Carubv10027507m.g N 0.741
mgf016064m Mimulus guttatus mgf016064m N 0.741
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.741
Bo8g079200 Brassica oleracea Bo8g079200 N 0.741
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.741
Solyc01g107190.2 Solanum lycopersicum Solyc01g107190.2 N 0.741
GLYMA17G17540 Glycine max GLYMA17G17540 N 0.741
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.741
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.741
Gorai.005G232500 Gossypium raimondii Gorai.005G232500 N 0.741
Bo2g168020 Brassica oleracea Bo2g168020 N 0.741
LBD37 Arabidopsis lyrata fgenesh2_kg.8__2670__AT5G67420.1 N 0.741
Ca_02208 Cicer arietinum Ca_02208 N 0.729
TCM_007211 Theobroma cacao TCM_007211 N 0.729
MTR_5g015880 Medicago truncatula MTR_5g015880 N 0.729
Bra036040 Brassica rapa Bra036040 N 0.729
mgf016023m Mimulus guttatus mgf016023m N 0.729
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N 0.729
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.729
OGLUM03G23580 Oryza glumaepatula OGLUM03G23580 N 0.718
OBART03G22820 Oryza barthii OBART03G22820 N 0.718
MDP0000794101 Malus domestica MDP0000794101 N 0.718
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.718
Bo1g003550 Brassica oleracea Bo1g003550 N 0.718
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.718
MDP0000239820 Malus domestica MDP0000239820 N 0.718
MDP0000151330 Malus domestica MDP0000151330 N 0.718
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.718
PRUPE_ppa010480mg Prunus persica PRUPE_ppa010480mg N 0.718
PK03075.1 Cannabis sativa PK03075.1 N 0.718
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.718
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.718
gene25541-v1.0-hybrid Fragaria vesca gene25541-v1.0-hybrid N 0.718
OS03G0445700 Oryza sativa OS03G0445700 N 0.718
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.718
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.718
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.718
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.718
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N 0.706
Pm005389 Prunus mume Pm005389 N 0.706
LBD39 Arabidopsis thaliana AT4G37540 N 0.706
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.706
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.706
estExt_gwp_gw1.C_2030014 Physcomitrella patens estExt_gwp_gw1.C_2030014 N 0.706
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.706