PK03075.1 (Cannabis sativa)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 PK03075.1 T247373_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK03075.1 LOB 18 119

Links

Other LOB family TFs
Other Cannabis sativa TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.959
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.959
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.959
Cla014228 Citrullus lanatus Cla014228 N 0.959
TCM_000766 Theobroma cacao TCM_000766 N 0.959
GLYMA17G17540 Glycine max GLYMA17G17540 N 0.949
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.948
Cucsa.103050 Cucumis sativus Cucsa.103050 N 0.948
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.948
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.948
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.948
Aquca_042_00143 Aquilegia coerulea Aquca_042_00143 N 0.939
cassava7497.valid.m1 Manihot esculenta cassava7497.valid.m1 N 0.939
29661.m000902 Ricinus communis 29661.m000902 N 0.939
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N 0.939
Ca_09342 Cicer arietinum Ca_09342 N 0.938
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.938
GLYMA05G22120 Glycine max GLYMA05G22120 N 0.929
GLYMA11G05280 Glycine max GLYMA11G05280 N 0.929
Gorai.008G081100 Gossypium raimondii Gorai.008G081100 N 0.929
GLYMA01G40010 Glycine max GLYMA01G40010 N 0.929
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.928
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.928
Bo8g079200 Brassica oleracea Bo8g079200 N 0.928
Bo1g003550 Brassica oleracea Bo1g003550 N 0.928
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.928
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.928
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.928
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.928
Bra036040 Brassica rapa Bra036040 N 0.928
Bo7g099150 Brassica oleracea Bo7g099150 N 0.918
Bra012913 Brassica rapa Bra012913 N 0.918
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.918
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.918
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.918
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.918
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.918
MTR_5g015880 Medicago truncatula MTR_5g015880 N 0.918
Bra011772 Brassica rapa Bra011772 N 0.918
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.918
LBD39 Arabidopsis thaliana AT4G37540 N 0.908
LBD39 Arabidopsis lyrata fgenesh2_kg.7__297__AT4G37540.1 N 0.908
LBD38 Arabidopsis thaliana AT3G49940 N 0.908
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N 0.908
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.908
Ca_02208 Cicer arietinum Ca_02208 N 0.908
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N 0.908
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.908
Bostr.0568s0168 Boechera stricta Bostr.0568s0168 N 0.907
Bra037847 Brassica rapa Bra037847 N 0.907
Thhalv10004811m.g Eutrema salsugineum Thhalv10004811m.g N 0.907
Bo2g168020 Brassica oleracea Bo2g168020 N 0.907
LBD37 Arabidopsis lyrata fgenesh2_kg.8__2670__AT5G67420.1 N 0.907
Cagra.0342s0030 Capsella grandiflora Cagra.0342s0030 N 0.907
Bostr.7867s1612 Boechera stricta Bostr.7867s1612 N 0.898
Bo7g063630 Brassica oleracea Bo7g063630 N 0.898
GSMUA_Achr3G30130_001 Musa acuminata GSMUA_Achr3G30130_001 N 0.898
GSMUA_Achr3G18860_001 Musa acuminata GSMUA_Achr3G18860_001 N 0.898
AMTR_s00137p00087340 Amborella trichopoda AMTR_s00137p00087340 N 0.898
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N 0.898
Bo5g132850 Brassica oleracea Bo5g132850 N 0.898
Bra012164 Brassica rapa Bra012164 N 0.898
Bo9g019150 Brassica oleracea Bo9g019150 N 0.898
MDP0000239820 Malus domestica MDP0000239820 N 0.897
MDP0000151330 Malus domestica MDP0000151330 N 0.897
Carubv10027507m.g Capsella rubella Carubv10027507m.g N 0.897
LjSGA_036652.1 Lotus japonicus LjSGA_036652.1 N 0.897
Bra031833 Brassica rapa Bra031833 N 0.897
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.897
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N 0.888
LBD37 Arabidopsis thaliana AT5G67420 N 0.888
mgf016064m Mimulus guttatus mgf016064m N 0.888
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N 0.887
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N 0.878
Bo7g118580 Brassica oleracea Bo7g118580 N 0.878
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N 0.878
GSMUA_Achr7G26260_001 Musa acuminata GSMUA_Achr7G26260_001 N 0.878
Bra017831 Brassica rapa Bra017831 N 0.876
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.876
Bo9g018500 Brassica oleracea Bo9g018500 N 0.876
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.876
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.876
LPERR07G17890 Leersia perrieri LPERR07G17890 N 0.875
OS03G0445700 Oryza sativa OS03G0445700 N 0.866
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.866
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.866
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.866
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.866
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.866
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.866
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.866
GRMZM2G044902 Zea mays GRMZM2G044902 N 0.866
OBART03G22820 Oryza barthii OBART03G22820 N 0.866
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.866
OGLUM03G23580 Oryza glumaepatula OGLUM03G23580 N 0.857
30170.m013752 Ricinus communis 30170.m013752 N 0.857
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N 0.856
Sb01g031790 Sorghum bicolor Sb01g031790 N 0.856
Pm002404 Prunus mume Pm002404 N 0.855
cassava35733.valid.m1 Manihot esculenta cassava35733.valid.m1 N 0.847
Pavir.J18418 Panicum virgatum Pavir.J18418 N 0.847
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.847
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.845
AMTR_s00137p00051070 Amborella trichopoda AMTR_s00137p00051070 N 0.845
Pavir.Ia03080 Panicum virgatum Pavir.Ia03080 N 0.845
PK15647.1 Cannabis sativa PK15647.1 N 0.840
evm.TU.supercontig_106.63 Carica papaya evm.TU.supercontig_106.63 N 0.837
Pavir.Bb01170 Panicum virgatum Pavir.Bb01170 N 0.837
Si031011m.g Setaria italica Si031011m.g N 0.837
OB03G31560 Oryza brachyantha OB03G31560 N 0.837
LPERR03G19360 Leersia perrieri LPERR03G19360 N 0.837
Pm005389 Prunus mume Pm005389 N 0.835
mgf007319m Mimulus guttatus mgf007319m N 0.835
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.835
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.835
PK25954.1 Cannabis sativa PK25954.1 N 0.826
ORUFI07G21460 Oryza rufipogon ORUFI07G21460 N 0.825
ORGLA07G0157700 Oryza glaberrima ORGLA07G0157700 N 0.825
SapurV1A.0845s0090 Salix purpurea SapurV1A.0845s0090 N 0.825
ONIVA07G19050 Oryza nivara ONIVA07G19050 N 0.825
OBART07G20600 Oryza barthii OBART07G20600 N 0.825
OGLUM07G20380 Oryza glumaepatula OGLUM07G20380 N 0.825
OMERI07G17270 Oryza meridionalis OMERI07G17270 N 0.825
OPUNC07G19440 Oryza punctata OPUNC07G19440 N 0.825
OPUNC07G19460 Oryza punctata OPUNC07G19460 N 0.825
OS07G0589000 Oryza sativa OS07G0589000 N 0.825
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N 0.825
BGIOSGA026049 Oryza indica BGIOSGA026049 N 0.825
PK03977.1 Cannabis sativa PK03977.1 N 0.816
VIT_03s0091g00670 Vitis vinifera VIT_03s0091g00670 N 0.816
Sb02g038030 Sorghum bicolor Sb02g038030 N 0.816
Pavir.Ba01055 Panicum virgatum Pavir.Ba01055 N 0.816
PGSC0003DMG400025752 Solanum tuberosum PGSC0003DMG400025752 N 0.814
GSMUA_Achr6G07770_001 Musa acuminata GSMUA_Achr6G07770_001 N 0.814
estExt_gwp_gw1.C_2030014 Physcomitrella patens estExt_gwp_gw1.C_2030014 N 0.814
POPTR_0014s01770 Populus trichocarpa POPTR_0014s01770 N 0.808
Solyc01g107190.2 Solanum lycopersicum Solyc01g107190.2 N 0.806
Gorai.010G025100 Gossypium raimondii Gorai.010G025100 N 0.806
Cucsa.352730 Cucumis sativus Cucsa.352730 N 0.804
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N 0.798
Gorai.009G218800 Gossypium raimondii Gorai.009G218800 N 0.796
Ciclev10003746m.g Citrus clementina Ciclev10003746m.g N 0.796
orange1.1g029809m.g Citrus sinensis orange1.1g029809m.g N 0.796
cassava9459.m1 Manihot esculenta cassava9459.m1 N 0.794
mgf016023m Mimulus guttatus mgf016023m N 0.794
MDP0000794101 Malus domestica MDP0000794101 N 0.794
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N 0.794
MLOC_11838 Hordeum vulgare MLOC_11838 N 0.794
Pm021281 Prunus mume Pm021281 N 0.794
28152.m000905 Ricinus communis 28152.m000905 N 0.794
Traes_2BS_5DF7F4FEE Triticum aestivum Traes_2BS_5DF7F4FEE N 0.794
Ciclev10029274m.g Citrus clementina Ciclev10029274m.g N 0.794
GLYMA14G09750 Glycine max GLYMA14G09750 N 0.794
MDP0000747679 Malus domestica MDP0000747679 N 0.786
MDP0000487015 Malus domestica MDP0000487015 N 0.786
SapurV1A.0019s0260 Salix purpurea SapurV1A.0019s0260 N 0.786
PRUPE_ppa022806mg Prunus persica PRUPE_ppa022806mg N 0.786
BRADI1G22920 Brachypodium distachyon BRADI1G22920 N 0.786
MDP0000139025 Malus domestica MDP0000139025 N 0.784
TCM_034722 Theobroma cacao TCM_034722 N 0.784
Cla020920 Citrullus lanatus Cla020920 N 0.784
GRMZM2G177110 Zea mays GRMZM2G177110 N 0.784
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.784
Traes_2AS_942884399 Triticum aestivum Traes_2AS_942884399 N 0.784
Eucgr.F00115 Eucalyptus grandis Eucgr.F00115 N 0.784
POPTR_0001s30280 Populus trichocarpa POPTR_0001s30280 N 0.776
SELMODRAFT_61520 Selaginella moellendorffii SELMODRAFT_61520 N 0.776
GLYMA20G26910 Glycine max GLYMA20G26910 N 0.773
GLYMA17G35440 Glycine max GLYMA17G35440 N 0.773
SELMODRAFT_37532 Selaginella moellendorffii SELMODRAFT_37532 N 0.773
TCM_007211 Theobroma cacao TCM_007211 N 0.773
gene25541-v1.0-hybrid Fragaria vesca gene25541-v1.0-hybrid N 0.773
Lus10007758.g Linum usitatissimum Lus10007758.g N 0.773
Lus10018697.g Linum usitatissimum Lus10018697.g N 0.765
Eucgr.G01261 Eucalyptus grandis Eucgr.G01261 N 0.765
Gorai.005G232500 Gossypium raimondii Gorai.005G232500 N 0.763
GLYMA10G40421 Glycine max GLYMA10G40421 N 0.753
GSMUA_Achr2G13440_001 Musa acuminata GSMUA_Achr2G13440_001 N 0.753
chr1.CM0088.550.nd Lotus japonicus chr1.CM0088.550.nd N 0.753
MDP0000247079 Malus domestica MDP0000247079 N 0.745
MDP0000261146 Malus domestica MDP0000261146 N 0.745
GSMUA_Achr4G32550_001 Musa acuminata GSMUA_Achr4G32550_001 N 0.740
Traes_4BL_D44ACD58E Triticum aestivum Traes_4BL_D44ACD58E N 0.725
Solyc04g077990.2 Solanum lycopersicum Solyc04g077990.2 N 0.724
MTR_1g106420 Medicago truncatula MTR_1g106420 N 0.722
GLYMA19G06280 Glycine max GLYMA19G06280 N 0.722
orange1.1g029970m.g Citrus sinensis orange1.1g029970m.g N 0.718
PGSC0003DMG400021509 Solanum tuberosum PGSC0003DMG400021509 N 0.714
OB03G33950 Oryza brachyantha OB03G33950 N 0.711
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.711
Sb03g007270 Sorghum bicolor Sb03g007270 N 0.704
chr5.CM0200.600.nd Lotus japonicus chr5.CM0200.600.nd N 0.704
Si022660m.g Setaria italica Si022660m.g N 0.701
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.701
PK03169.1 Cannabis sativa PK03169.1 N 0.701
PRUPE_ppa010480mg Prunus persica PRUPE_ppa010480mg N 0.701
TCM_019459 Theobroma cacao TCM_019459 N 0.701
Si037275m.g Setaria italica Si037275m.g N 0.701
BGIOSGA010258 Oryza indica BGIOSGA010258 N 0.701
Pavir.J16587 Panicum virgatum Pavir.J16587 N 0.701
OPUNC03G23160 Oryza punctata OPUNC03G23160 N 0.701
ORGLA03G0239300 Oryza glaberrima ORGLA03G0239300 N 0.701
ONIVA03G26970 Oryza nivara ONIVA03G26970 N 0.701
OGLUM03G26640 Oryza glumaepatula OGLUM03G26640 N 0.701
OBART03G25820 Oryza barthii OBART03G25820 N 0.701
ORUFI03G26700 Oryza rufipogon ORUFI03G26700 N 0.701
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N 0.701
OS03G0609500 Oryza sativa OS03G0609500 N 0.701
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.701
Aquca_017_00034 Aquilegia coerulea Aquca_017_00034 N 0.701
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.701
GRMZM2G017319 Zea mays GRMZM2G017319 N 0.701
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.701