PK15647.1 (Cannabis sativa)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 PK15647.1 T247386_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK15647.1 LOB 14 99

Links

Other LOB family TFs
Other Cannabis sativa TFs

260 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.889
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N 0.889
Eucgr.G01261 Eucalyptus grandis Eucgr.G01261 N 0.877
evm.TU.supercontig_106.63 Carica papaya evm.TU.supercontig_106.63 N 0.877
GLYMA20G26910 Glycine max GLYMA20G26910 N 0.877
Ciclev10029274m.g Citrus clementina Ciclev10029274m.g N 0.864
AMTR_s00137p00087340 Amborella trichopoda AMTR_s00137p00087340 N 0.864
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.852
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.852
Ca_09342 Cicer arietinum Ca_09342 N 0.852
GLYMA10G40421 Glycine max GLYMA10G40421 N 0.852
cassava7497.valid.m1 Manihot esculenta cassava7497.valid.m1 N 0.852
TCM_000766 Theobroma cacao TCM_000766 N 0.852
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N 0.852
cassava9459.m1 Manihot esculenta cassava9459.m1 N 0.852
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.852
GLYMA05G22120 Glycine max GLYMA05G22120 N 0.852
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N 0.852
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.852
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.852
LBD38 Arabidopsis thaliana AT3G49940 N 0.852
29661.m000902 Ricinus communis 29661.m000902 N 0.852
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.852
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.852
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.852
GSMUA_Achr3G30130_001 Musa acuminata GSMUA_Achr3G30130_001 N 0.852
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.852
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.840
28152.m000905 Ricinus communis 28152.m000905 N 0.840
Ca_02208 Cicer arietinum Ca_02208 N 0.840
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N 0.840
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.840
PRUPE_ppa022806mg Prunus persica PRUPE_ppa022806mg N 0.840
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N 0.840
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.840
mgf016064m Mimulus guttatus mgf016064m N 0.840
PK03075.1 Cannabis sativa PK03075.1 N 0.840
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N 0.840
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.840
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.840
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.840
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.840
MDP0000239820 Malus domestica MDP0000239820 N 0.840
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.840
MDP0000151330 Malus domestica MDP0000151330 N 0.840
LPERR03G19360 Leersia perrieri LPERR03G19360 N 0.827
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.827
Cucsa.103050 Cucumis sativus Cucsa.103050 N 0.827
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N 0.827
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.827
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.827
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.827
OS03G0445700 Oryza sativa OS03G0445700 N 0.827
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.827
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.827
Cla014228 Citrullus lanatus Cla014228 N 0.827
OBART03G22820 Oryza barthii OBART03G22820 N 0.827
OGLUM03G23580 Oryza glumaepatula OGLUM03G23580 N 0.827
Pm021281 Prunus mume Pm021281 N 0.827
GSMUA_Achr3G18860_001 Musa acuminata GSMUA_Achr3G18860_001 N 0.827
Thhalv10004811m.g Eutrema salsugineum Thhalv10004811m.g N 0.827
Bra037847 Brassica rapa Bra037847 N 0.827
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.827
Aquca_042_00143 Aquilegia coerulea Aquca_042_00143 N 0.827
LBD37 Arabidopsis lyrata fgenesh2_kg.8__2670__AT5G67420.1 N 0.827
gene25541-v1.0-hybrid Fragaria vesca gene25541-v1.0-hybrid N 0.827
Bra031833 Brassica rapa Bra031833 N 0.827
Gorai.008G081100 Gossypium raimondii Gorai.008G081100 N 0.827
Bo2g168020 Brassica oleracea Bo2g168020 N 0.827
Bo7g063630 Brassica oleracea Bo7g063630 N 0.827
Bo9g019150 Brassica oleracea Bo9g019150 N 0.827
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N 0.827
Bra012164 Brassica rapa Bra012164 N 0.827
GLYMA01G40010 Glycine max GLYMA01G40010 N 0.827
GLYMA11G05280 Glycine max GLYMA11G05280 N 0.827
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N 0.827
Cagra.0342s0030 Capsella grandiflora Cagra.0342s0030 N 0.827
Bostr.0568s0168 Boechera stricta Bostr.0568s0168 N 0.827
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.827
GSMUA_Achr7G26260_001 Musa acuminata GSMUA_Achr7G26260_001 N 0.827
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.827
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.827
GLYMA17G17540 Glycine max GLYMA17G17540 N 0.827
Carubv10027507m.g Capsella rubella Carubv10027507m.g N 0.827
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.827
Bo5g132850 Brassica oleracea Bo5g132850 N 0.827
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.815
PK03977.1 Cannabis sativa PK03977.1 N 0.815
Gorai.005G232500 Gossypium raimondii Gorai.005G232500 N 0.815
30170.m013752 Ricinus communis 30170.m013752 N 0.815
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.815
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.815
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.815
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.815
TCM_007211 Theobroma cacao TCM_007211 N 0.815
MDP0000139025 Malus domestica MDP0000139025 N 0.815
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.815
Bra036040 Brassica rapa Bra036040 N 0.815
Bra012913 Brassica rapa Bra012913 N 0.815
AMTR_s00137p00051070 Amborella trichopoda AMTR_s00137p00051070 N 0.815
OB03G31560 Oryza brachyantha OB03G31560 N 0.815
Bra011772 Brassica rapa Bra011772 N 0.815
Bo1g003550 Brassica oleracea Bo1g003550 N 0.815
Bo8g079200 Brassica oleracea Bo8g079200 N 0.815
MTR_5g015880 Medicago truncatula MTR_5g015880 N 0.815
Bo7g099150 Brassica oleracea Bo7g099150 N 0.815
cassava35733.valid.m1 Manihot esculenta cassava35733.valid.m1 N 0.802
Bo7g118580 Brassica oleracea Bo7g118580 N 0.802
Pavir.J18418 Panicum virgatum Pavir.J18418 N 0.802
LBD39 Arabidopsis thaliana AT4G37540 N 0.802
estExt_gwp_gw1.C_2030014 Physcomitrella patens estExt_gwp_gw1.C_2030014 N 0.802
Sb01g031790 Sorghum bicolor Sb01g031790 N 0.802
chr1.CM0088.550.nd Lotus japonicus chr1.CM0088.550.nd N 0.802
POPTR_0001s30280 Populus trichocarpa POPTR_0001s30280 N 0.802
Bostr.7867s1612 Boechera stricta Bostr.7867s1612 N 0.802
LBD39 Arabidopsis lyrata fgenesh2_kg.7__297__AT4G37540.1 N 0.802
VIT_03s0091g00670 Vitis vinifera VIT_03s0091g00670 N 0.802
chr5.CM0200.600.nd Lotus japonicus chr5.CM0200.600.nd N 0.802
GRMZM2G044902 Zea mays GRMZM2G044902 N 0.802
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.802
MDP0000794101 Malus domestica MDP0000794101 N 0.790
MTR_1g106420 Medicago truncatula MTR_1g106420 N 0.790
SapurV1A.0019s0260 Salix purpurea SapurV1A.0019s0260 N 0.790
Pm005389 Prunus mume Pm005389 N 0.790
SELMODRAFT_61520 Selaginella moellendorffii SELMODRAFT_61520 N 0.790
orange1.1g029809m.g Citrus sinensis orange1.1g029809m.g N 0.790
Pavir.Ia03080 Panicum virgatum Pavir.Ia03080 N 0.790
Traes_2AS_942884399 Triticum aestivum Traes_2AS_942884399 N 0.790
MLOC_11838 Hordeum vulgare MLOC_11838 N 0.790
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.790
Lus10018697.g Linum usitatissimum Lus10018697.g N 0.790
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.790
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N 0.790
mgf007319m Mimulus guttatus mgf007319m N 0.790
Lus10007758.g Linum usitatissimum Lus10007758.g N 0.790
Sb02g038030 Sorghum bicolor Sb02g038030 N 0.790
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N 0.790
SapurV1A.0845s0090 Salix purpurea SapurV1A.0845s0090 N 0.790
GLYMA14G09750 Glycine max GLYMA14G09750 N 0.790
Ciclev10003746m.g Citrus clementina Ciclev10003746m.g N 0.790
SELMODRAFT_37532 Selaginella moellendorffii SELMODRAFT_37532 N 0.790
Bra017831 Brassica rapa Bra017831 N 0.790
MDP0000487015 Malus domestica MDP0000487015 N 0.778
mgf016023m Mimulus guttatus mgf016023m N 0.778
MDP0000261146 Malus domestica MDP0000261146 N 0.778
Cla020920 Citrullus lanatus Cla020920 N 0.778
GLYMA17G35440 Glycine max GLYMA17G35440 N 0.778
POPTR_0014s01770 Populus trichocarpa POPTR_0014s01770 N 0.778
Cucsa.352730 Cucumis sativus Cucsa.352730 N 0.778
MDP0000747679 Malus domestica MDP0000747679 N 0.778
Si031011m.g Setaria italica Si031011m.g N 0.778
MDP0000247079 Malus domestica MDP0000247079 N 0.778
Solyc04g077990.2 Solanum lycopersicum Solyc04g077990.2 N 0.778
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N 0.778
Pavir.Bb01170 Panicum virgatum Pavir.Bb01170 N 0.778
Traes_2BS_5DF7F4FEE Triticum aestivum Traes_2BS_5DF7F4FEE N 0.778
Bo9g018500 Brassica oleracea Bo9g018500 N 0.765
Pavir.Ba01055 Panicum virgatum Pavir.Ba01055 N 0.765
ONIVA07G19050 Oryza nivara ONIVA07G19050 N 0.765
PGSC0003DMG400021509 Solanum tuberosum PGSC0003DMG400021509 N 0.765
OGLUM07G20380 Oryza glumaepatula OGLUM07G20380 N 0.765
PGSC0003DMG400025752 Solanum tuberosum PGSC0003DMG400025752 N 0.765
OMERI07G17270 Oryza meridionalis OMERI07G17270 N 0.765
OS07G0589000 Oryza sativa OS07G0589000 N 0.765
ORUFI07G21460 Oryza rufipogon ORUFI07G21460 N 0.765
OBART07G20600 Oryza barthii OBART07G20600 N 0.765
BGIOSGA026049 Oryza indica BGIOSGA026049 N 0.765
OPUNC07G19460 Oryza punctata OPUNC07G19460 N 0.765
OPUNC07G19440 Oryza punctata OPUNC07G19440 N 0.765
ORGLA07G0157700 Oryza glaberrima ORGLA07G0157700 N 0.765
BRADI1G22920 Brachypodium distachyon BRADI1G22920 N 0.753
Solyc01g107190.2 Solanum lycopersicum Solyc01g107190.2 N 0.753
TCM_034722 Theobroma cacao TCM_034722 N 0.753
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.753
OB03G33950 Oryza brachyantha OB03G33950 N 0.753
Gorai.009G218800 Gossypium raimondii Gorai.009G218800 N 0.741
Gorai.010G025100 Gossypium raimondii Gorai.010G025100 N 0.741
ORGLA03G0239300 Oryza glaberrima ORGLA03G0239300 N 0.741
ORUFI03G26700 Oryza rufipogon ORUFI03G26700 N 0.741
GRMZM2G017319 Zea mays GRMZM2G017319 N 0.741
GRMZM2G177110 Zea mays GRMZM2G177110 N 0.741
GSMUA_Achr2G13440_001 Musa acuminata GSMUA_Achr2G13440_001 N 0.741
OS03G0609500 Oryza sativa OS03G0609500 N 0.741
GSMUA_Achr6G07770_001 Musa acuminata GSMUA_Achr6G07770_001 N 0.741
BGIOSGA010258 Oryza indica BGIOSGA010258 N 0.741
Traes_4BS_3BCDF0612 Triticum aestivum Traes_4BS_3BCDF0612 N 0.741
Traes_4AL_7241716B6 Triticum aestivum Traes_4AL_7241716B6 N 0.741
Traes_4DS_9575221BB Triticum aestivum Traes_4DS_9575221BB N 0.741
TRIUR3_28321 Triticum urartu TRIUR3_28321 N 0.741
27524.m000293 Ricinus communis 27524.m000293 N 0.741
OGLUM03G26640 Oryza glumaepatula OGLUM03G26640 N 0.741
cassava38982.m1 Manihot esculenta cassava38982.m1 N 0.741
Pavir.J16587 Panicum virgatum Pavir.J16587 N 0.741
OBART03G25820 Oryza barthii OBART03G25820 N 0.741
OPUNC03G23160 Oryza punctata OPUNC03G23160 N 0.741
ONIVA03G26970 Oryza nivara ONIVA03G26970 N 0.741
Lus10028470.g Linum usitatissimum Lus10028470.g N 0.741
Si037275m.g Setaria italica Si037275m.g N 0.741
MLOC_51325 Hordeum vulgare MLOC_51325 N 0.741
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N 0.728
BRADI1G14780 Brachypodium distachyon BRADI1G14780 N 0.728
BGIOSGA002703 Oryza indica BGIOSGA002703 N 0.728
LPERR03G21440 Leersia perrieri LPERR03G21440 N 0.728
mgf010898m Mimulus guttatus mgf010898m N 0.728
OGLUM01G02100 Oryza glumaepatula OGLUM01G02100 N 0.728
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.728
LPERR01G01830 Leersia perrieri LPERR01G01830 N 0.728
ORUFI01G02010 Oryza rufipogon ORUFI01G02010 N 0.728
OB01G11830 Oryza brachyantha OB01G11830 N 0.728
OBART01G01940 Oryza barthii OBART01G01940 N 0.728
OMERI01G01380 Oryza meridionalis OMERI01G01380 N 0.728
TCM_009888 Theobroma cacao TCM_009888 N 0.728
OPUNC01G01670 Oryza punctata OPUNC01G01670 N 0.728
ONIVA01G02110 Oryza nivara ONIVA01G02110 N 0.728
ORGLA01G0016600 Oryza glaberrima ORGLA01G0016600 N 0.728
Sb03g007270 Sorghum bicolor Sb03g007270 N 0.716
Cla007208 Citrullus lanatus Cla007208 N 0.716
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N 0.716
cassava43296.valid.m1 Manihot esculenta cassava43296.valid.m1 N 0.716
PK03169.1 Cannabis sativa PK03169.1 N 0.716
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N 0.716
cassava60.valid.m1 Manihot esculenta cassava60.valid.m1 N 0.716
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N 0.716
TCM_019459 Theobroma cacao TCM_019459 N 0.716
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N 0.716
VIT_14s0006g02950 Vitis vinifera VIT_14s0006g02950 N 0.716
Si002412m.g Setaria italica Si002412m.g N 0.716
28207.m000107 Ricinus communis 28207.m000107 N 0.716
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N 0.716
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N 0.716
GSMUA_Achr4G32550_001 Musa acuminata GSMUA_Achr4G32550_001 N 0.716
GSMUA_AchrUn_randomG00460_001 Musa acuminata GSMUA_AchrUn_randomG00460_001 N 0.716
Cucsa.031350 Cucumis sativus Cucsa.031350 N 0.716
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.716
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 0.716
GLYMA08G48040 Glycine max GLYMA08G48040 N 0.704
GSMUA_Achr4G03700_001 Musa acuminata GSMUA_Achr4G03700_001 N 0.704
Sb09g030780 Sorghum bicolor Sb09g030780 N 0.704
PRUPE_ppa009213mg Prunus persica PRUPE_ppa009213mg N 0.704
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.704
GRMZM2G060544 Zea mays GRMZM2G060544 N 0.704
POPTR_0010s13480 Populus trichocarpa POPTR_0010s13480 N 0.704
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N 0.704
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.704
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N 0.704
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N 0.704
Solyc05g009320.2 Solanum lycopersicum Solyc05g009320.2 N 0.704
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N 0.704
GSMUA_Achr9G21360_001 Musa acuminata GSMUA_Achr9G21360_001 N 0.704
Eucgr.F02492 Eucalyptus grandis Eucgr.F02492 N 0.704
MDP0000136037 Malus domestica MDP0000136037 N 0.704
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.704
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N 0.704
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N 0.704
Gorai.002G217800 Gossypium raimondii Gorai.002G217800 N 0.704
Bo3g055690 Brassica oleracea Bo3g055690 N 0.704
Pavir.Ea01295 Panicum virgatum Pavir.Ea01295 N 0.704
Bra021433 Brassica rapa Bra021433 N 0.704
Gorai.008G056000 Gossypium raimondii Gorai.008G056000 N 0.704
Bo1g156310 Brassica oleracea Bo1g156310 N 0.704