CBG19420 (Caenorhabditis briggsae)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 CBG19420 T248067_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
madf-4
M00683_2.00 		Caenorhabditis elegans
NDNCGYANN
NNTRCGNHN		 PBM
Narasimhan et al.(2015)
pTH9096 		0.941 0.798
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG19420 MADF 23 122

Links

Other MADF family TFs
Other Caenorhabditis briggsae TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE06058 Caenorhabditis remanei CRE06058 I 0.950
madf-4 Caenorhabditis elegans WBGene00011575 D 0.941
CBN22408 Caenorhabditis brenneri CBN22408 I 0.935
CBN05962 Caenorhabditis brenneri CBN05962 I 0.935
CJA07373 Caenorhabditis japonica CJA07373 I 0.915
CJA40670 Caenorhabditis japonica CJA40670 I 0.915