Afo_R001565 (Aptenodytes forsteri)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Afo_R001565 T250060_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAIF1_CHICK
M01260_2.00
Gallus gallus
NNNDRCGTAN

NTACGYHNNN
PBM
Lambert et al.(2019)
pTH9808
0.971 0.909
naif1
M02281_2.00
Xenopus tropicalis
NNNCGYANN

NNTRCGNNN
PBM
Weirauch et al.(2014)
pTH8560
0.860 0.636
naif1.S
M02282_2.00
Xenopus laevis
NNDRCGTAN

NTACGYHNN
PBM
Weirauch et al.(2014)
pTH9299
0.860 0.600
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R001565 MADF 43 108

Links

Other MADF family TFs
Other Aptenodytes forsteri TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo1g017840 Brassica oleracea Bo1g017840 N 0.000
Bo9g071680 Brassica oleracea Bo9g071680 N 0.000
Bo8g007060 Brassica oleracea Bo8g007060 N 0.000
Bo7g064790 Brassica oleracea Bo7g064790 N 0.000
Bo7g043390 Brassica oleracea Bo7g043390 N 0.000
Bo6g099260 Brassica oleracea Bo6g099260 N 0.000
Bo5g123420 Brassica oleracea Bo5g123420 N 0.000
Bo4g096780 Brassica oleracea Bo4g096780 N 0.000
Bo3g169160 Brassica oleracea Bo3g169160 N 0.000
Bo2g100490 Brassica oleracea Bo2g100490 N 0.000
Bo1g114890 Brassica oleracea Bo1g114890 N 0.000
Bo9g163500 Brassica oleracea Bo9g163500 N 0.000