Pm024289 (Prunus mume)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Pm024289 T250421_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.911 0.809
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.911 0.809
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm024289 MADF 48 119
Pm024289 MADF 450 519

Links

Other MADF family TFs
Other Prunus mume TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
KAFR_0E02900 Kazachstania africana KAFR_0E02900 I 0.000
KLLA0_D11902g Kluyveromyces lactis KLLA0_D11902g I 0.000
KLTH0E11330g Kluyveromyces thermotolerans KLTH0E11330g I 0.000
Kwal_11824 Kluyveromyces waltii Kwal_11824 I 0.000
PAS_chr1-3_0170 Komagataella pastoris PAS_chr1-3_0170 I 0.000
SAKL0H11440g Lachancea kluyveri SAKL0H11440g I 0.000
LALA0_S04e04720g Lachancea lanzarotensis LALA0_S04e04720g I 0.000
KLTH0E11330g Lachancea thermotolerans KLTH0E11330g I 0.000
NCAS_0C02430 Naumovozyma castellii NCAS_0C02430 I 0.000
NCAS_0B02480 Naumovozyma castellii NCAS_0B02480 I 0.000
NDAI_0C05210 Naumovozyma dairenensis NDAI_0C05210 I 0.000
HPODL_01443 Ogataea parapolymorpha HPODL_01443 I 0.000
XP_002489513.1 Pichia pastoris XP_002489513.1 I 0.000
SU7_3598 Saccharomyces arboricola SU7_3598 I 0.000
25018_YPL038W Saccharomyces bayanus 25018_YPL038W I 0.000
Scas_Contig721.56 Saccharomyces castellii Scas_Contig721.56 I 0.000
Scas_Contig568.5 Saccharomyces castellii Scas_Contig568.5 I 0.000
MET32 Saccharomyces cerevisiae YDR253C D 0.000
MET31 Saccharomyces cerevisiae YPL038W D 0.000
SKUD_139603 Saccharomyces kudriavzevii SKUD_139603 I 0.000
22143_YPL038W Saccharomyces mikatae 22143_YPL038W I 0.000
3987_YDR253C Saccharomyces mikatae 3987_YDR253C I 0.000
23564_YPL038W Saccharomyces paradoxus 23564_YPL038W I 0.000
4678_YDR253C Saccharomyces paradoxus 4678_YDR253C I 0.000
TBLA_0A00350 Tetrapisispora blattae TBLA_0A00350 I 0.000
TPHA_0L01320 Tetrapisispora phaffii TPHA_0L01320 I 0.000
BN7_573 Wickerhamomyces ciferrii BN7_573 I 0.000
ZBAI_00597 Zygosaccharomyces bailii ZBAI_00597 I 0.000
ZBAI_05898 Zygosaccharomyces bailii ZBAI_05898 I 0.000
ZYRO0F08162g Zygosaccharomyces rouxii ZYRO0F08162g I 0.000