Pavir.Aa01102 (Panicum virgatum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Pavir.Aa01102 T250805_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK26075.1
M01265_2.00 		Cannabis sativa
NNRGTDANWN
NWNTHACYNN		 PBM
Lambert et al.(2019)
pTH11260 		0.878 0.739
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa01102.1.p MADF 111 182
Pavir.Aa01102.2.p MADF 111 182

Links

Other MADF family TFs
Other Panicum virgatum TFs

Invalid Input OrderBy

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action