CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ba01421
(
Panicum virgatum
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Pavir.Ba01421
T250810_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba01421.1.p
MADF
36
126
YEAKWLLRNRAKLKWSDWVDIAREVSAHCADDAAAAGKPPGGGNSAKTPNQCKNKIESMKKRYRAESAAVARAGPAAAGPSWRFFARMDGL
Links
Other
MADF
family TFs
Other
Panicum virgatum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si030430m.g
Setaria italica
Si030430m.g
N
0.971
Pavir.Bb02591
Panicum virgatum
Pavir.Bb02591
N
0.963
Sb02g032600
Sorghum bicolor
Sb02g032600
N
0.946
BGIOSGA031252
Oryza indica
BGIOSGA031252
N
0.943
ONIVA09G20540
Oryza nivara
ONIVA09G20540
N
0.943
ORGLA09G0156000
Oryza glaberrima
ORGLA09G0156000
N
0.943
OGLUM09G20110
Oryza glumaepatula
OGLUM09G20110
N
0.943
OMERI09G14610
Oryza meridionalis
OMERI09G14610
N
0.943
OBART09G19410
Oryza barthii
OBART09G19410
N
0.943
LPERR09G15280
Leersia perrieri
LPERR09G15280
N
0.939
GRMZM2G375307
Zea mays
GRMZM2G375307
N
0.936
BRADI4G37730
Brachypodium distachyon
BRADI4G37730
N
0.914
OB09G26010
Oryza brachyantha
OB09G26010
N
0.912
ORUFI09G20970
Oryza rufipogon
ORUFI09G20970
N
0.908
OPUNC09G17780
Oryza punctata
OPUNC09G17780
N
0.908
OS09G0558200
Oryza sativa
OS09G0558200
N
0.908
GSMUA_Achr4G05890_001
Musa acuminata
GSMUA_Achr4G05890_001
N
0.861