ENSPSIG00000010381 (Pelodiscus sinensis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ENSPSIG00000010381 T253801_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MEF2D
M03343_2.00
Homo sapiens
DCTAWAAATAGM

KCTATTTWTAGH
SELEX
Jolma et al.(2013)
MEF2D_1
1.000 1.000
MEF2D
M05555_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2D_eDBD_HT-SELEX
1.000 1.000
MEF2D
M09250_2.00
Homo sapiens
CTAWAAATAGMH

DKCTATTTWTAG
Misc
Kulakovskiy et al.(2013)
MEF2D_HUMAN.H11MO.0.A
1.000 1.000
Mef2d
M09252_2.00
Mus musculus
DDCTAWAAATAGMH

DKCTATTTWTAGHH
Misc
Kulakovskiy et al.(2013)
MEF2D_MOUSE.H11MO.0.A
1.000 1.000
MEF2D
M10957_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2D_Q4
1.000 1.000
MEF2D
M05556_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2D_eDBD_Methyl-HT-SELEX
1.000 1.000
MEF2A
M03340_2.00
Homo sapiens
KCTAWAAATAGM

KCTATTTWTAGM
SELEX
Jolma et al.(2013)
MEF2A_1
0.958 0.958
MEF2A
M07979_2.00
Homo sapiens
NDDHYAAAAATARHH

DDYTATTTTTRDHHN
ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2A_HudsonAlpha
0.958 0.958
MEF2A
M08212_2.00
Homo sapiens
CTAWWWWTAG

CTAWWWWTAG
ChIP-seq
Contrino et al.(2012)
Mv88
0.958 0.958
MEF2A
M08213_2.00
Homo sapiens
AAAATAGM

KCTATTTT
ChIP-seq
Contrino et al.(2012)
Mv90
0.958 0.958
MEF2A
M09247_2.00
Homo sapiens
DYYAAAAATAGMH

DKCTATTTTTRRH
Misc
Kulakovskiy et al.(2013)
MEF2A_HUMAN.H11MO.0.A
0.958 0.958
Mef2a
M09255_2.00
Mus musculus
DDCYAWAAATARMH

DKYTATTTWTRGHH
Misc
Kulakovskiy et al.(2013)
MEF2A_MOUSE.H11MO.0.A
0.958 0.958
Mef2a
M09599_2.00
Mus musculus
CYNDAAATAG

CTATTTHNRG
Misc
Heinz et al.(2010)
HL1-Mef2a.biotin_GSE21529
0.958 0.958
MEF2A
M10933_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AMEF2_Q6
0.958 0.958
MEF2A
M10934_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMEF2_Q6
0.958 0.958
MEF2A
M10935_2.00
Homo sapiens
BTCTAAAAATAACYCY

RGRGTTATTTTTAGAV
Transfac
Matys et al.(2006)
V$MEF2_01
0.958 0.958
MEF2A
M10936_2.00
Homo sapiens
BNNNDDDCTAWAAATAGMHNNN

NNNDKCTATTTWTAGHHHNNNV
Transfac
Matys et al.(2006)
V$MEF2_02
0.958 0.958
MEF2A
M10937_2.00
Homo sapiens
NNNNDWKCTAWAAATAGMHHNN

NNDDKCTATTTWTAGMWHNNNN
Transfac
Matys et al.(2006)
V$MEF2_03
0.958 0.958
MEF2A
M10938_2.00
Homo sapiens
NVTGTTRCTAWAAATAGAAHHN

NDDWTCTATTTWTAGYAACABN
Transfac
Matys et al.(2006)
V$MEF2_04
0.958 0.958
MEF2A
M10939_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2A_05
0.958 0.958
MEF2A
M10940_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2A_Q6
0.958 0.958
MEF2A
M10941_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2_Q6_02
0.958 0.958
MEF2A
M10942_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MMEF2_Q6
0.958 0.958
MEF2A
M10943_2.00
Homo sapiens
NDKCTAWAAATAGMHH

DDKCTATTTWTAGMHN
Transfac
Matys et al.(2006)
V$RSRFC4_01
0.958 0.958
MEF2A
M10944_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RSRFC4_Q2
0.958 0.958
MEF2C
M02745_2.00
Homo sapiens
TWCTAWAAATAG

CTATTTWTAGWA
SELEX
Jolma et al.(2010)
MEF2C_dimer
0.938 0.938
MEF2C
M05551_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2C_FL_HT-SELEX
0.938 0.938
MEF2C
M08149_2.00
Homo sapiens
NDDMYAAAAATAGMH

DKCTATTTTTRKHHN
ChIP-seq
Mathelier et al.(2014)
MA0497.1
0.938 0.938
MEF2C
M07980_2.00
Homo sapiens
NDDYYAAAAATAGHH

DDCTATTTTTRRHHN
ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2C_HudsonAlpha
0.938 0.938
MEF2C
M09248_2.00
Homo sapiens
DYYAAAAATARMH

DKYTATTTTTRRH
Misc
Kulakovskiy et al.(2013)
MEF2C_HUMAN.H11MO.0.A
0.938 0.938
Mef2c
M09253_2.00
Mus musculus
DDMYAAAAATAGMHN

NDKCTATTTTTRKHH
Misc
Kulakovskiy et al.(2013)
MEF2C_MOUSE.H11MO.0.A
0.938 0.938
MEF2C
M09597_2.00
Homo sapiens
DHYWDAAATARM

KYTATTTHWRDH
Misc
Heinz et al.(2010)
GM12878-Mef2c_GSE32465
0.938 0.938
MEF2C
M10945_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2C_02
0.938 0.938
MEF2C
M10946_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2C_Q4
0.938 0.938
MEF2C
M05552_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2C_FL_Methyl-HT-SELEX
0.938 0.938
MEF2B
M03344_2.00
Homo sapiens
RCTAWAAATAGM

KCTATTTWTAGY
SELEX
Jolma et al.(2013)
MEF2B_1
0.896 0.896
MEF2B
M05557_2.00
Homo sapiens
CYNDWWWHGG

CCDWWWHNRG
SELEX
Yin et al.(2017)
MEF2B_eDBD_HT-SELEX
0.896 0.896
MEF2B
M05559_2.00
Homo sapiens
CCVDWTATGGTAACA

TGTTACCATAWHBGG
SELEX
Yin et al.(2017)
MEF2B_FL_HT-SELEX
0.896 0.896
Mef2
M08214_2.00
Drosophila melanogaster
YTAWWWWTAR

YTAWWWWTAR
ChIP-seq
Contrino et al.(2012)
Mf26
0.896 0.896
MEF2B
M09251_2.00
Homo sapiens
CYWAAAATAGHHHH

DDDDCTATTTTWRG
Misc
Kulakovskiy et al.(2013)
MEF2B_HUMAN.H11MO.0.A
0.896 0.896
MEF2B
M05558_2.00
Homo sapiens
CYWWWWWNGG

CCNWWWWWRG
SELEX
Yin et al.(2017)
MEF2B_eDBD_Methyl-HT-SELEX
0.896 0.896
MEF2B
M05560_2.00
Homo sapiens
CCVDATATGGTAACR

YGTTACCATATHBGG
SELEX
Yin et al.(2017)
MEF2B_FL_Methyl-HT-SELEX
0.896 0.896
Mef2b
M10958_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2B_02
0.854 0.854
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000011479 MADS box 10 57

Links

Other MADS box family TFs
Other Pelodiscus sinensis TFs

488 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R000627 Calypte anna Aan_R000627 N 0.000
MYSM1 Anolis carolinensis ENSACAG00000005486 N 0.000
ENSAMEG00000000263 Ailuropoda melanoleuca ENSAMEG00000000263 N 0.000
ENSAMXG00000013289 Astyanax mexicanus ENSAMXG00000013289 N 0.000
MYSM1 Bos taurus ENSBTAG00000013961 N 0.000
MYSM1 Choloepus hoffmanni ENSCHOG00000006619 N 0.000
MYSM1 Callithrix jacchus ENSCJAG00000016020 N 0.000
MYSM1 Cavia porcellus ENSCPOG00000006557 N 0.000
ENSCSAG00000001326 Chlorocebus sabaeus ENSCSAG00000001326 N 0.000
mysm1 Danio rerio ENSDARG00000034693 N 0.000
ENSDORG00000005983 Dipodomys ordii ENSDORG00000005983 N 0.000
MYSM1 Equus caballus ENSECAG00000024212 N 0.000
ENSFALG00000012350 Ficedula albicollis ENSFALG00000012350 N 0.000
MYSM1 Felis catus ENSFCAG00000026572 N 0.000
MYSM1 Homo sapiens ENSG00000162601 N 0.000
mysm1 Gasterosteus aculeatus ENSGACG00000001511 N 0.000
MYSM1 Gallus gallus ENSGALG00000010869 N 0.000
MYSM1 Gorilla gorilla ENSGGOG00000005238 N 0.000
ENSLACG00000002536 Latimeria chalumnae ENSLACG00000002536 N 0.000
MYSM1 Loxodonta africana ENSLAFG00000003849 N 0.000
ENSLOCG00000008884 Lepisosteus oculatus ENSLOCG00000008884 N 0.000
ENSMEUG00000006060 Macropus eugenii ENSMEUG00000006060 N 0.000
MYSM1 Meleagris gallopavo ENSMGAG00000011514 N 0.000
MYSM1 Myotis lucifugus ENSMLUG00000001665 N 0.000
MYSM1 Macaca mulatta ENSMMUG00000011800 N 0.000
MYSM1 Monodelphis domestica ENSMODG00000003341 N 0.000
ENSMPUG00000007462 Mustela putorius furo ENSMPUG00000007462 N 0.000
Mysm1 Mus musculus ENSMUSG00000062627 N 0.000
ENSNLEG00000014766 Nomascus leucogenys ENSNLEG00000014766 N 0.000
ENSOARG00000008464 Ovis aries ENSOARG00000008464 N 0.000
ENSOCUG00000029356 Oryctolagus cuniculus ENSOCUG00000029356 N 0.000
MYSM1 Otolemur garnettii ENSOGAG00000004571 N 0.000
ENSONIG00000002787 Oreochromis niloticus ENSONIG00000002787 N 0.000
ENSP00000418734 Macaca fascicularis ENSP00000418734 N 0.000
ENSP00000418734-D1 Bos grunniens ENSP00000418734-D1 N 0.000
ENSPANG00000021852 Papio anubis ENSPANG00000021852 N 0.000
ENSPPYG00000001296 Pongo abelii ENSPPYG00000001296 N 0.000
ENSPSIG00000003847 Pelodiscus sinensis ENSPSIG00000003847 N 0.000
MYSM1 Pan troglodytes ENSPTRG00000000796 N 0.000
MYSM1 Pteropus vampyrus ENSPVAG00000012800 N 0.000
Mysm1 Rattus norvegicus ENSRNOG00000026299 N 0.000
MYSM1 Sorex araneus ENSSARG00000003002 N 0.000
ENSSHAG00000013607 Sarcophilus harrisii ENSSHAG00000013607 N 0.000
MYSM1 Sus scrofa ENSSSCG00000003830 N 0.000
ENSSTOG00000024678 Ictidomys tridecemlineatus ENSSTOG00000024678 N 0.000
ENSTGUG00000009663 Taeniopygia guttata ENSTGUG00000009663 N 0.000
ENSTSYG00000003664 Tarsius syrichta ENSTSYG00000003664 N 0.000
MYSM1 Tursiops truncatus ENSTTRG00000005999 N 0.000
MYSM1 Vicugna pacos ENSVPAG00000007237 N 0.000
Gfo_R010197 Geospiza fortis Gfo_R010197 N 0.000
Myotis_brandtii_MYSM1_10020945 Myotis brandtii Myotis_brandtii_MYSM1_10020945 N 0.000
Ogr14877 Ophisaurus gracilis Ogr14877 N 0.000
Pvit_02365 Pogona vitticeps Pvit_02365 N 0.000
mysm1 Xenopus tropicalis XB-GENE-1032957 N 0.000
mysm1.L Xenopus laevis XB-GENE-1032962 N 0.000