OBART06G24100 (Oryza barthii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OBART06G24100 T254991_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART06G24100.1 MADS box 10 49

Links

Other MADS box family TFs
Other Oryza barthii TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI06G24380 Oryza meridionalis OMERI06G24380 I 0.850
ORUFI06G25880 Oryza rufipogon ORUFI06G25880 I 0.825
OS06G0667200 Oryza sativa OS06G0667200 I 0.825
OLONG_011724 Oryza longistaminata OLONG_011724 I 0.825
ONIVA03G43670 Oryza nivara ONIVA03G43670 I 0.825
BGIOSGA023435 Oryza indica BGIOSGA023435 I 0.825
OPUNC06G21840 Oryza punctata OPUNC06G21840 I 0.800
OGLUM06G25360 Oryza glumaepatula OGLUM06G25360 N 0.731
MDP0000179718 Malus domestica MDP0000179718 I 0.727
SELMODRAFT_450804 Selaginella moellendorffii SELMODRAFT_450804 I 0.700
PRUPE_ppa019267mg Prunus persica PRUPE_ppa019267mg I 0.700
Carubv10002596m.g Capsella rubella Carubv10002596m.g I 0.700
SELMODRAFT_450837 Selaginella moellendorffii SELMODRAFT_450837 I 0.700
MADS29 Oryza sativa OS02G0170300 I 0.700
Traes_6AS_57E50EE92 Triticum aestivum Traes_6AS_57E50EE92 I 0.700
TRIUR3_26896 Triticum urartu TRIUR3_26896 I 0.700
Pm019404 Prunus mume Pm019404 I 0.700
Traes_6DS_9BBDCC9F7 Triticum aestivum Traes_6DS_9BBDCC9F7 I 0.700
Bo3g009340 Brassica oleracea Bo3g009340 I 0.700
Traes_6BS_5789476CB Triticum aestivum Traes_6BS_5789476CB I 0.700
Cagra.5588s0006 Capsella grandiflora Cagra.5588s0006 I 0.700
ORGLA02G0049700 Oryza glaberrima ORGLA02G0049700 I 0.700
OBART02G05380 Oryza barthii OBART02G05380 I 0.700
OGLUM02G05240 Oryza glumaepatula OGLUM02G05240 I 0.700
OB02G14670 Oryza brachyantha OB02G14670 I 0.700
MLOC_65966 Hordeum vulgare MLOC_65966 I 0.700
F775_30836 Aegilops tauschii F775_30836 I 0.700
LPERR02G04610 Leersia perrieri LPERR02G04610 I 0.700
Bra006214 Brassica rapa Bra006214 I 0.700
OMERI02G06250 Oryza meridionalis OMERI02G06250 I 0.700
OPUNC02G04560 Oryza punctata OPUNC02G04560 I 0.700
BRADI3G05260 Brachypodium distachyon BRADI3G05260 I 0.700
BGIOSGA007056 Oryza indica BGIOSGA007056 I 0.700
ONIVA02G05710 Oryza nivara ONIVA02G05710 I 0.700
Bo8g050720 Brassica oleracea Bo8g050720 I 0.700
ORUFI02G05500 Oryza rufipogon ORUFI02G05500 I 0.700