CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI08G04440
(
Oryza meridionalis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OMERI08G04440
T255202_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI08G04440.1
MADS box
14
58
KQPQQSSSAFERLHGELVREAGELAVSCGADVTVLAVPPARSSSF
Links
Other
MADS box
family TFs
Other
Oryza meridionalis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA08G0038000
Oryza glaberrima
ORGLA08G0038000
N
0.867
ONIVA08G04210
Oryza nivara
ONIVA08G04210
N
0.867
OGLUM08G04610
Oryza glumaepatula
OGLUM08G04610
N
0.867
BGIOSGA027573
Oryza indica
BGIOSGA027573
N
0.844
ORUFI08G04840
Oryza rufipogon
ORUFI08G04840
N
0.844
OBART08G04360
Oryza barthii
OBART08G04360
N
0.767