CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ONIVA08G04210
(
Oryza nivara
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ONIVA08G04210
T255267_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA08G04210.1
MADS box
15
59
QQQSSSSSTFERLHGELVREAGELAASCGADVTVLAVPPARSSSF
Links
Other
MADS box
family TFs
Other
Oryza nivara
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA08G0038000
Oryza glaberrima
ORGLA08G0038000
N
1.000
OGLUM08G04610
Oryza glumaepatula
OGLUM08G04610
N
1.000
BGIOSGA027573
Oryza indica
BGIOSGA027573
N
0.978
ORUFI08G04840
Oryza rufipogon
ORUFI08G04840
N
0.956
OBART08G04360
Oryza barthii
OBART08G04360
N
0.907
OMERI08G04440
Oryza meridionalis
OMERI08G04440
N
0.867