ORUFI12G13820 (Oryza rufipogon)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ORUFI12G13820 T255489_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MADS2
M10966_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_02 		0.793 0.793
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI12G13820.1 MADS box 10 38

Links

Other MADS box family TFs
Other Oryza rufipogon TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA12G12810 Oryza nivara ONIVA12G12810 I 1.000
OMERI01G36400 Oryza meridionalis OMERI01G36400 I 0.793
MADS2 Oryza sativa OS01G0883100 D 0.793
OLONG_003010 Oryza longistaminata OLONG_003010 I 0.793
BGIOSGA000377 Oryza indica BGIOSGA000377 I 0.793
ONIVA01G44390 Oryza nivara ONIVA01G44390 I 0.793
ORGLA01G0334300 Oryza glaberrima ORGLA01G0334300 I 0.793
OPUNC01G38250 Oryza punctata OPUNC01G38250 I 0.793
ORUFI05G05970 Oryza rufipogon ORUFI05G05970 I 0.793
OGLUM01G43760 Oryza glumaepatula OGLUM01G43760 I 0.793
OB01G48280 Oryza brachyantha OB01G48280 I 0.793
LPERR01G34040 Leersia perrieri LPERR01G34040 I 0.793
OBART01G39540 Oryza barthii OBART01G39540 I 0.793
Pavir.Ea03625 Panicum virgatum Pavir.Ea03625 I 0.759
Pavir.J19259 Panicum virgatum Pavir.J19259 I 0.759
Si002929m.g Setaria italica Si002929m.g I 0.759
ORUFI05G18270 Oryza rufipogon ORUFI05G18270 I 0.759
MADS4 Oryza sativa OS05G0423400 I 0.759
Sb03g041860 Sorghum bicolor Sb03g041860 I 0.759
OMERI05G14780 Oryza meridionalis OMERI05G14780 I 0.759
GSMUA_Achr6G18670_001 Musa acuminata GSMUA_Achr6G18670_001 I 0.759
GRMZM2G110153 Zea mays GRMZM2G110153 I 0.759
BGIOSGA019900 Oryza indica BGIOSGA019900 I 0.759
OB05G24910 Oryza brachyantha OB05G24910 I 0.759
OBART05G17040 Oryza barthii OBART05G17040 I 0.759
ONIVA05G17790 Oryza nivara ONIVA05G17790 I 0.759
OLONG_005253 Oryza longistaminata OLONG_005253 I 0.759
ORGLA05G0147400 Oryza glaberrima ORGLA05G0147400 I 0.759