CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0006s27470
(
Populus trichocarpa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
POPTR_0006s27470
T255832_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0006s27470.1
MADS box
13
60
ETAEQRSVTFTKRRQGLFNKAADLCRICDAQIAIMVSSTGSKEKVYTF
Links
Other
MADS box
family TFs
Other
Populus trichocarpa
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.2538s0010
Salix purpurea
SapurV1A.2538s0010
N
1.000
POPTR_0005s14660
Populus trichocarpa
POPTR_0005s14660
N
1.000
SapurV1A.0984s0100
Salix purpurea
SapurV1A.0984s0100
N
1.000
POPTR_0012s11190
Populus trichocarpa
POPTR_0012s11190
N
1.000
SapurV1A.1139s0030
Salix purpurea
SapurV1A.1139s0030
N
0.913