CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SapurV1A.2538s0010
(
Salix purpurea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
SapurV1A.2538s0010
T259079_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.2538s0010.1.p
MADS box
13
60
ETAEQRSVTFTKRRQGLFNKAADLCRICDAQIAIMVSSTGSKEKVYTF
Links
Other
MADS box
family TFs
Other
Salix purpurea
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0984s0100
Salix purpurea
SapurV1A.0984s0100
N
1.000
POPTR_0005s14660
Populus trichocarpa
POPTR_0005s14660
N
1.000
POPTR_0012s11190
Populus trichocarpa
POPTR_0012s11190
N
1.000
POPTR_0006s27470
Populus trichocarpa
POPTR_0006s27470
N
1.000
SapurV1A.1139s0030
Salix purpurea
SapurV1A.1139s0030
N
0.913