Traes_7BS_9D42F9BEA (Triticum aestivum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Traes_7BS_9D42F9BEA T256615_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL16
M06987_2.00
Arabidopsis thaliana
TWCCHAAWDDGGWAA

TTWCCHHWTTDGGWA
Dap-seq
OMalley et al.(2016)
AGL16_col_a
0.759 0.759
AGL16
M06988_2.00
Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS

STTTCCHWWTWDGGWAANWHW
Dap-seq
OMalley et al.(2016)
AGL16_colamp_a
0.759 0.759
A1YJE4_HORVD
M10900_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM10_01
0.724 0.724
MAD55_ORYSJ
M10962_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS55_01
0.724 0.724
Q4U0F1_WHEAT
M10978_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT2_01
0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_7BS_9D42F9BEA.2 MADS box 1 29

Links

Other MADS box family TFs
Other Triticum aestivum TFs

Invalid Input OrderBy

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action