CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm014444
(
Prunus mume
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Pm014444
T257055_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm014444
MADS box
10
62
LIANERARKTTFQKRRKGMMKKAYEFSTLCELDVCMIIYGPKQTDRPPELYTW
Links
Other
MADS box
family TFs
Other
Prunus mume
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa027181mg
Prunus persica
PRUPE_ppa027181mg
N
0.958
MDP0000753870
Malus domestica
MDP0000753870
N
0.792
MDP0000309181
Malus domestica
MDP0000309181
N
0.792
Pm017475
Prunus mume
Pm017475
N
0.771
PRUPE_ppa021970mg
Prunus persica
PRUPE_ppa021970mg
N
0.771
gene11233-v1.0-hybrid
Fragaria vesca
gene11233-v1.0-hybrid
N
0.708