CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm017475
(
Prunus mume
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Pm017475
T257063_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm017475
MADS box
10
56
LIANERSRKTTFQKRSKGMMKKAYEFSTLCEVDVCIIIYGPKLTDRP
Links
Other
MADS box
family TFs
Other
Prunus mume
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa021970mg
Prunus persica
PRUPE_ppa021970mg
N
1.000
MDP0000753870
Malus domestica
MDP0000753870
N
0.933
PRUPE_ppa027181mg
Prunus persica
PRUPE_ppa027181mg
N
0.822
Pm014444
Prunus mume
Pm014444
N
0.771
gene11233-v1.0-hybrid
Fragaria vesca
gene11233-v1.0-hybrid
N
0.711