Cagra.6942s0024 (Capsella grandiflora)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Cagra.6942s0024 T257714_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.6942s0024.1.p MADS box 10 55

Links

Other MADS box family TFs
Other Capsella grandiflora TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10027564m.g Capsella rubella Carubv10027564m.g N 1.000
Bostr.26833s0688 Boechera stricta Bostr.26833s0688 N 0.977
fgenesh1_pg.C_scaffold_8001596 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001596 N 0.977
AT5G55690 Arabidopsis thaliana AT5G55690 N 0.932
Thhalv10015661m.g Eutrema salsugineum Thhalv10015661m.g N 0.860
AGL82 Arabidopsis thaliana AT5G58890 N 0.733
Bra002611 Brassica rapa Bra002611 N 0.727
Bo3g021400 Brassica oleracea Bo3g021400 N 0.711
Bra028965 Brassica rapa Bra028965 N 0.711
Carubv10027979m.g Capsella rubella Carubv10027979m.g N 0.702
AGL82 Arabidopsis lyrata scaffold_802501.1 N 0.702
Cagra.0891s0086 Capsella grandiflora Cagra.0891s0086 N 0.702