Carubv10003642m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10003642m.g T257736_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10003642m MADS box 24 71

Links

Other MADS box family TFs
Other Capsella rubella TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.29077s0001 Capsella grandiflora Cagra.29077s0001 N 0.979
Carubv10003716m.g Capsella rubella Carubv10003716m.g N 0.896
AGL105 Arabidopsis thaliana AT5G37415 I 0.846
fgenesh2_kg.6__2751__AT5G27070.1 Arabidopsis lyrata fgenesh2_kg.6__2751__AT5G27070.1 N 0.830
scaffold_602835.1 Arabidopsis lyrata scaffold_602835.1 N 0.830
fgenesh2_kg.6__2748__AT5G27944.1 Arabidopsis lyrata fgenesh2_kg.6__2748__AT5G27944.1 N 0.830
AGL54 Arabidopsis thaliana AT5G27090 N 0.830
AGL89 Arabidopsis thaliana AT5G27580 N 0.830
AT5G27944 Arabidopsis thaliana AT5G27944 N 0.830
AGL53 Arabidopsis thaliana AT5G27070 N 0.771
AGL93 Arabidopsis thaliana AT5G26950 N 0.771
Bostr.29827s0112 Boechera stricta Bostr.29827s0112 N 0.766
Bostr.10058s0014 Boechera stricta Bostr.10058s0014 I 0.702
Bostr.3751s0043 Boechera stricta Bostr.3751s0043 I 0.702