AGL89 (Arabidopsis thaliana)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AT5G27580 T252915_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G27580.1 MADS box 27 75

Links

Other MADS box family TFs
Other Arabidopsis thaliana TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.6__2748__AT5G27944.1 Arabidopsis lyrata fgenesh2_kg.6__2748__AT5G27944.1 N 0.958
scaffold_602835.1 Arabidopsis lyrata scaffold_602835.1 N 0.958
AT5G27944 Arabidopsis thaliana AT5G27944 N 0.958
fgenesh2_kg.6__2751__AT5G27070.1 Arabidopsis lyrata fgenesh2_kg.6__2751__AT5G27070.1 N 0.938
AGL93 Arabidopsis thaliana AT5G26950 N 0.917
AGL53 Arabidopsis thaliana AT5G27070 N 0.917
AGL54 Arabidopsis thaliana AT5G27090 N 0.917
Carubv10003642m.g Capsella rubella Carubv10003642m.g N 0.830
Carubv10003716m.g Capsella rubella Carubv10003716m.g N 0.812
Cagra.29077s0001 Capsella grandiflora Cagra.29077s0001 N 0.809
Bostr.29827s0112 Boechera stricta Bostr.29827s0112 N 0.771
AGL105 Arabidopsis thaliana AT5G37415 I 0.769
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I 0.717
Cagra.1681s0033 Capsella grandiflora Cagra.1681s0033 I 0.708
AGL76 Arabidopsis thaliana AT5G40120 I 0.708
AGL77 Arabidopsis thaliana AT5G38740 I 0.708
AGL81 Arabidopsis thaliana AT5G39750 I 0.708
Carubv10015986m.g Capsella rubella Carubv10015986m.g I 0.708
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I 0.708
AGL75 Arabidopsis thaliana AT5G41200 I 0.705
AGL98 Arabidopsis thaliana AT5G39810 I 0.702
Bostr.10058s0014 Boechera stricta Bostr.10058s0014 I 0.702