AGL75 (Arabidopsis thaliana)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AT5G41200 T252926_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL78
M10932_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G65330_01 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G41200.1 MADS box 14 57

Links

Other MADS box family TFs
Other Arabidopsis thaliana TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL76 Arabidopsis thaliana AT5G40120 I 0.977
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I 0.977
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I 0.977
AGL81 Arabidopsis thaliana AT5G39750 I 0.977
AGL43 Arabidopsis thaliana AT5G40220 I 0.977
AGL77 Arabidopsis thaliana AT5G38740 I 0.977
fgenesh2_kg.7__3412__AT5G41200.1 Arabidopsis lyrata fgenesh2_kg.7__3412__AT5G41200.1 I 0.955
AGL98 Arabidopsis thaliana AT5G39810 I 0.955
AGL105 Arabidopsis thaliana AT5G37415 I 0.923
Bra025607 Brassica rapa Bra025607 N 0.837
Bo4g139620 Brassica oleracea Bo4g139620 N 0.818
Bostr.3751s0043 Boechera stricta Bostr.3751s0043 I 0.818
Bostr.10058s0014 Boechera stricta Bostr.10058s0014 I 0.818
Thhalv10028282m.g Eutrema salsugineum Thhalv10028282m.g I 0.795
Bostr.3751s0031 Boechera stricta Bostr.3751s0031 I 0.795
Bostr.3751s0039 Boechera stricta Bostr.3751s0039 I 0.795
Bostr.3751s0030 Boechera stricta Bostr.3751s0030 I 0.795
Bra025619 Brassica rapa Bra025619 N 0.795
Bo4g139640 Brassica oleracea Bo4g139640 N 0.795
Bo4g139560 Brassica oleracea Bo4g139560 N 0.795
Thhalv10028184m.g Eutrema salsugineum Thhalv10028184m.g I 0.750
Carubv10006654m.g Capsella rubella Carubv10006654m.g I 0.750
Bo00615s090 Brassica oleracea Bo00615s090 I 0.750
Bra025609 Brassica rapa Bra025609 I 0.745
fgenesh2_kg.8__2584__AT5G65330.1 Arabidopsis lyrata fgenesh2_kg.8__2584__AT5G65330.1 I 0.727
Thhalv10005313m.g Eutrema salsugineum Thhalv10005313m.g I 0.727
Bra031864 Brassica rapa Bra031864 I 0.727
Carubv10007591m.g Capsella rubella Carubv10007591m.g I 0.727
Bostr.0568s0255 Boechera stricta Bostr.0568s0255 I 0.727
AGL51 Arabidopsis thaliana AT4G02235 I 0.705
Bo4g139260 Brassica oleracea Bo4g139260 I 0.705
scaffold_602835.1 Arabidopsis lyrata scaffold_602835.1 N 0.705
fgenesh2_kg.6__2748__AT5G27944.1 Arabidopsis lyrata fgenesh2_kg.6__2748__AT5G27944.1 N 0.705
AGL89 Arabidopsis thaliana AT5G27580 N 0.705