CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000315688
(
Malus domestica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
MDP0000315688
T258742_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000315688
MADS box
31
78
RVEDKNKRHVTFSKRKRGIFNKAAELSVLTGAETAAIVVSSNGKVFCF
Links
Other
MADS box
family TFs
Other
Malus domestica
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000291070
Malus domestica
MDP0000291070
N
0.938
Pm013170
Prunus mume
Pm013170
N
0.896
MDP0000611204
Malus domestica
MDP0000611204
N
0.875
PRUPE_ppa024282mg
Prunus persica
PRUPE_ppa024282mg
N
0.854
Pm013201
Prunus mume
Pm013201
N
0.833
MDP0000696331
Malus domestica
MDP0000696331
N
0.774
gene05451-v1.0-hybrid
Fragaria vesca
gene05451-v1.0-hybrid
N
0.750