CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK22420.1
(
Cannabis sativa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
PK22420.1
T259256_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q9AVU7_MALDO
M11027_2.00
Malus domestica
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PI_01
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK22420.1
MADS box
11
57
KIENTSNRAVTYAKRKAGIFKKAKEIAILCDVKVSLIIVSGSGKMDA
Links
Other
MADS box
family TFs
Other
Cannabis sativa
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Q9AVU7_MALDO
Malus domestica
Q9AVU7_MALDO
D
0.702
Gorai.002G223100
Gossypium raimondii
Gorai.002G223100
I
0.702