CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjSGA_031058.2
(
Lotus japonicus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
LjSGA_031058.2
T259378_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
0.739
0.739
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_031058.2
MADS box
10
55
RLENTNGRQATYAKRKNGIIKKASELSILCDIDIILLMFSPSGKPS
Links
Other
MADS box
family TFs
Other
Lotus japonicus
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy