Cla005887 (Citrullus lanatus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cla005887 T261243_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla005887 MBD 172 246

Links

Other MBD family TFs
Other Citrullus lanatus TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R005955 Calypte anna Aan_R005955 I 0.000
Afo_R003306 Aptenodytes forsteri Afo_R003306 I 0.000
Alligator_sinensis_CCG011602.1 Alligator sinensis Alligator_sinensis_CCG011602.1 I 0.000
Brh_R007819 Buceros rhinoceros Brh_R007819 I 0.000
ENSAMXG00000014024 Astyanax mexicanus ENSAMXG00000014024 I 0.000
ENSAPLG00000005898 Anas platyrhynchos ENSAPLG00000005898 I 0.000
PRDM16 Canis familiaris ENSCAFG00000019473 I 0.000
PRDM16 Danio rerio ENSDARG00000078324 I 0.000
PRDM16 Equus caballus ENSECAG00000017045 I 0.000
ENSFALG00000009580 Ficedula albicollis ENSFALG00000009580 I 0.000
PRDM16 Homo sapiens ENSG00000142611 D 0.000
si:ch211-263k4.2 Gasterosteus aculeatus ENSGACG00000006600 I 0.000
ENSGALG00000001063 Gallus gallus ENSGALG00000001063 I 0.000
PRDM16 Gorilla gorilla ENSGGOG00000003763 I 0.000
ENSGMOG00000015664 Gadus morhua ENSGMOG00000015664 I 0.000
PRDM16 Loxodonta africana ENSLAFG00000001071 I 0.000
ENSLOCG00000005336 Lepisosteus oculatus ENSLOCG00000005336 I 0.000
PRDM16 Meleagris gallopavo ENSMGAG00000001857 I 0.000
PRDM16 Macaca mulatta ENSMMUG00000009350 I 0.000
PRDM16 Otolemur garnettii ENSOGAG00000005055 I 0.000
ENSONIG00000002121 Oreochromis niloticus ENSONIG00000002121 I 0.000
si:ch211-263k4.2 Oryzias latipes ENSORLG00000004492 I 0.000
ENSP00000270722 Macaca fascicularis ENSP00000270722 I 0.000
ENSP00000417899-D2 Bos grunniens ENSP00000417899-D2 I 0.000
ENSPFOG00000010341 Poecilia formosa ENSPFOG00000010341 I 0.000
ENSPPYG00000001968 Pongo abelii ENSPPYG00000001968 I 0.000
ENSPSIG00000004093 Pelodiscus sinensis ENSPSIG00000004093 I 0.000
PRDM16 Sus scrofa ENSSSCG00000021490 I 0.000
ENSXMAG00000019072 Xiphophorus maculatus ENSXMAG00000019072 I 0.000
Gfo_R009744 Geospiza fortis Gfo_R009744 I 0.000
Ogr15306 Ophisaurus gracilis Ogr15306 I 0.000
XP_002938538 Xenopus tropicalis XP_002938538 I 0.000