CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EDA31
(
Arabidopsis thaliana
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
AT3G10000
T266429_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Recessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G10000.1
Myb
86
146
TGRWPRQETLMLLEVRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYTRSGKKCREKFENLY
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis thaliana
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.4686s0011
Capsella grandiflora
Cagra.4686s0011
N
0.909
EDA31
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3000901
N
0.909
Carubv10015883m.g
Capsella rubella
Carubv10015883m.g
N
0.909
Bostr.22252s0065
Boechera stricta
Bostr.22252s0065
N
0.909
PTL
Arabidopsis lyrata
fgenesh2_kg.6__282__AT5G03680.1
N
0.806
Bra028824
Brassica rapa
Bra028824
N
0.806
Bo2g004170
Brassica oleracea
Bo2g004170
N
0.806