CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTL
(
Arabidopsis lyrata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh2_kg.6__282__AT5G03680.1
T270821_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.6__282__AT5G03680.1
Myb
119
179
TGRWPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLY
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis lyrata
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g004170
Brassica oleracea
Bo2g004170
N
0.909
Bra028824
Brassica rapa
Bra028824
N
0.909
Cagra.4686s0011
Capsella grandiflora
Cagra.4686s0011
N
0.806
Carubv10015883m.g
Capsella rubella
Carubv10015883m.g
N
0.806
Bostr.22252s0065
Boechera stricta
Bostr.22252s0065
N
0.806
EDA31
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3000901
N
0.806
EDA31
Arabidopsis thaliana
AT3G10000
N
0.806
cassava3897.m1
Manihot esculenta
cassava3897.m1
N
0.744