MYB110 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT3G29020 T266459_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a putative transcription factor (MYB89).

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB105
M07031_2.00
Arabidopsis thaliana
TAACGGTWWHDDW

WHHDWWACCGTTA
Dap-seq
OMalley et al.(2016)
MYB105_col_a
0.731 0.774
MYB105
M07032_2.00
Arabidopsis thaliana
NNDWHDHTAACGGWWWH

DWWWCCGTTADHDWHNN
Dap-seq
OMalley et al.(2016)
MYB105_colamp_a
0.731 0.774
MYB56
M07130_2.00
Arabidopsis thaliana
DDHNHTAACKGWHWH

DWDWCMGTTADNDHH
Dap-seq
OMalley et al.(2016)
MYB56_col_a
0.713 0.731
MYB56
M07131_2.00
Arabidopsis thaliana
DNNHTAACGGWHWHD

HDWDWCCGTTADNNH
Dap-seq
OMalley et al.(2016)
MYB56_colamp_a
0.713 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G29020.1 Myb 65 111
AT3G29020.1 Myb 117 162
AT3G29020.2 Myb 67 113
AT3G29020.2 Myb 119 164

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.0556s0551 Boechera stricta Bostr.0556s0551 I 0.891
MYB110 Arabidopsis lyrata scaffold_500894.1 I 0.891
Cagra.1475s0003 Capsella grandiflora Cagra.1475s0003 I 0.883
Carubv10019103m.g Capsella rubella Carubv10019103m.g I 0.883
Thhalv10004648m.g Eutrema salsugineum Thhalv10004648m.g I 0.857
Bra039036 Brassica rapa Bra039036 I 0.845
Bo9g008750 Brassica oleracea Bo9g008750 I 0.829
Thhalv10028155m.g Eutrema salsugineum Thhalv10028155m.g I 0.755
TCM_033560 Theobroma cacao TCM_033560 I 0.752
Gorai.006G015200 Gossypium raimondii Gorai.006G015200 I 0.750
Eucgr.K01542 Eucalyptus grandis Eucgr.K01542 I 0.736
MYB105 Arabidopsis lyrata fgenesh2_kg.2__1220__AT1G69560.1 I 0.731
MYB105 Arabidopsis thaliana AT1G69560 D 0.731
Cla000326 Citrullus lanatus Cla000326 I 0.730
Sb03g010960 Sorghum bicolor Sb03g010960 I 0.729
GRMZM2G111731 Zea mays GRMZM2G111731 I 0.729
GRMZM2G312419 Zea mays GRMZM2G312419 I 0.729
Pavir.Ea01097 Panicum virgatum Pavir.Ea01097 I 0.729
ORUFI01G12050 Oryza rufipogon ORUFI01G12050 I 0.726
OGLUM01G12520 Oryza glumaepatula OGLUM01G12520 I 0.726
OPUNC01G10870 Oryza punctata OPUNC01G10870 I 0.726
OMERI01G10960 Oryza meridionalis OMERI01G10960 I 0.726
ONIVA01G13400 Oryza nivara ONIVA01G13400 I 0.726
OS01G0274800 Oryza sativa OS01G0274800 I 0.726
POPTR_0008s08760 Populus trichocarpa POPTR_0008s08760 I 0.726
Carubv10021327m.g Capsella rubella Carubv10021327m.g I 0.725
Cagra.0820s0004 Capsella grandiflora Cagra.0820s0004 I 0.725
LPERR01G10360 Leersia perrieri LPERR01G10360 I 0.722
Bostr.10273s0409 Boechera stricta Bostr.10273s0409 I 0.722
Bra004394 Brassica rapa Bra004394 I 0.722
Pavir.J21755 Panicum virgatum Pavir.J21755 I 0.719
Si004691m.g Setaria italica Si004691m.g I 0.719
Si005038m.g Setaria italica Si005038m.g I 0.719
Bostr.26527s0427 Boechera stricta Bostr.26527s0427 I 0.718
AtMYB56 Arabidopsis lyrata fgenesh2_kg.6__1780__AT5G17800.1 I 0.718
Thhalv10014113m.g Eutrema salsugineum Thhalv10014113m.g I 0.718
MLOC_71066 Hordeum vulgare MLOC_71066 I 0.717
cassava12378.valid.m1 Manihot esculenta cassava12378.valid.m1 I 0.717
TRAES3BF063000030CFD_g Triticum aestivum TRAES3BF063000030CFD_g I 0.717
Pavir.Hb01200 Panicum virgatum Pavir.Hb01200 I 0.716
GSMUA_Achr6G32250_001 Musa acuminata GSMUA_Achr6G32250_001 I 0.715
MYB56 Arabidopsis thaliana AT5G17800 D 0.713
Sb05g009460 Sorghum bicolor Sb05g009460 I 0.712
cassava3020.m1 Manihot esculenta cassava3020.m1 I 0.711
Pavir.J16832 Panicum virgatum Pavir.J16832 I 0.711
MTR_4g082040 Medicago truncatula MTR_4g082040 I 0.709
Sb03g010970 Sorghum bicolor Sb03g010970 I 0.709
28838.m000246 Ricinus communis 28838.m000246 I 0.707
MDP0000172476 Malus domestica MDP0000172476 I 0.706
Bra023637 Brassica rapa Bra023637 I 0.706
MDP0000878006 Malus domestica MDP0000878006 I 0.706
PDK_20s1366461g001 Phoenix dactylifera PDK_20s1366461g001 I 0.705
OB08G23250 Oryza brachyantha OB08G23250 I 0.705
Pavir.Fa00885 Panicum virgatum Pavir.Fa00885 I 0.705
GRMZM2G428555 Zea mays GRMZM2G428555 I 0.705
Sb07g021280 Sorghum bicolor Sb07g021280 I 0.705
BRADI3G36740 Brachypodium distachyon BRADI3G36740 I 0.705
Pavir.Fb01599 Panicum virgatum Pavir.Fb01599 I 0.705
Cucsa.337000 Cucumis sativus Cucsa.337000 I 0.704
Cla017770 Citrullus lanatus Cla017770 I 0.704
GSMUA_Achr3G16490_001 Musa acuminata GSMUA_Achr3G16490_001 I 0.704
Ciclev10011967m.g Citrus clementina Ciclev10011967m.g I 0.703
Bo6g109070 Brassica oleracea Bo6g109070 I 0.703
orange1.1g047550m.g Citrus sinensis orange1.1g047550m.g I 0.703
Cla010359 Citrullus lanatus Cla010359 I 0.701
ORGLA08G0138700 Oryza glaberrima ORGLA08G0138700 I 0.701
ONIVA08G17040 Oryza nivara ONIVA08G17040 I 0.701
Gorai.005G142000 Gossypium raimondii Gorai.005G142000 I 0.701
OPUNC08G13850 Oryza punctata OPUNC08G13850 I 0.701
Ciclev10031944m.g Citrus clementina Ciclev10031944m.g I 0.701
VIT_01s0026g02600 Vitis vinifera VIT_01s0026g02600 I 0.701
OS08G0435700 Oryza sativa OS08G0435700 I 0.701
cassava12017.valid.m1 Manihot esculenta cassava12017.valid.m1 I 0.701
ORUFI08G17710 Oryza rufipogon ORUFI08G17710 I 0.701
TCM_011689 Theobroma cacao TCM_011689 I 0.701
29813.m001506 Ricinus communis 29813.m001506 I 0.701
Cucsa.284980 Cucumis sativus Cucsa.284980 I 0.701
cassava17309.m1 Manihot esculenta cassava17309.m1 I 0.701
Eucgr.G02492 Eucalyptus grandis Eucgr.G02492 I 0.701
Gorai.013G086400 Gossypium raimondii Gorai.013G086400 I 0.701
OBART08G15790 Oryza barthii OBART08G15790 I 0.701
orange1.1g046309m.g Citrus sinensis orange1.1g046309m.g I 0.701
OMERI08G13100 Oryza meridionalis OMERI08G13100 I 0.701
OGLUM08G16550 Oryza glumaepatula OGLUM08G16550 I 0.701
BGIOSGA028724 Oryza indica BGIOSGA028724 I 0.701
SELMODRAFT_6100 Selaginella moellendorffii SELMODRAFT_6100 I 0.700
SELMODRAFT_6091 Selaginella moellendorffii SELMODRAFT_6091 I 0.700
Pavir.J31094 Panicum virgatum Pavir.J31094 I 0.700
AMTR_s00186p00015620 Amborella trichopoda AMTR_s00186p00015620 I 0.700
Cucsa.016540 Cucumis sativus Cucsa.016540 I 0.700
mgf018311m Mimulus guttatus mgf018311m I 0.699
BGIOSGA001907 Oryza indica BGIOSGA001907 I 0.699
TRIUR3_29043 Triticum urartu TRIUR3_29043 I 0.698
TRAES3BF142600060CFD_g Triticum aestivum TRAES3BF142600060CFD_g I 0.698
MLOC_3926 Hordeum vulgare MLOC_3926 I 0.698
cassava45348.m1 Manihot esculenta cassava45348.m1 I 0.698
Bo9g159830 Brassica oleracea Bo9g159830 I 0.697
Pavir.Cb01957 Panicum virgatum Pavir.Cb01957 I 0.697
AMTR_s00119p00105590 Amborella trichopoda AMTR_s00119p00105590 I 0.695
SapurV1A.1664s0020 Salix purpurea SapurV1A.1664s0020 I 0.695
PRUPE_ppa006434mg Prunus persica PRUPE_ppa006434mg I 0.695
cassava25953.m1 Manihot esculenta cassava25953.m1 I 0.695
Gorai.007G346400 Gossypium raimondii Gorai.007G346400 I 0.695
GSMUA_Achr10G12830_001 Musa acuminata GSMUA_Achr10G12830_001 I 0.695
POPTR_0013s06320 Populus trichocarpa POPTR_0013s06320 I 0.695
GSMUA_Achr3G09490_001 Musa acuminata GSMUA_Achr3G09490_001 I 0.695
gene29254-v1.0-hybrid Fragaria vesca gene29254-v1.0-hybrid I 0.695
MDP0000755899 Malus domestica MDP0000755899 I 0.695
Ciclev10020631m.g Citrus clementina Ciclev10020631m.g I 0.695
Pm025457 Prunus mume Pm025457 I 0.695
GSMUA_Achr9G04990_001 Musa acuminata GSMUA_Achr9G04990_001 I 0.695
PGSC0003DMG400024822 Solanum tuberosum PGSC0003DMG400024822 I 0.695
GSMUA_Achr6G15900_001 Musa acuminata GSMUA_Achr6G15900_001 I 0.695
PK28773.1 Cannabis sativa PK28773.1 I 0.695
evm.TU.supercontig_73.4 Carica papaya evm.TU.supercontig_73.4 I 0.695
SapurV1A.3733s0010 Salix purpurea SapurV1A.3733s0010 I 0.695
mgf021546m Mimulus guttatus mgf021546m I 0.693
gw1.74.13.1 Physcomitrella patens gw1.74.13.1 I 0.693
Solyc05g007870.1 Solanum lycopersicum Solyc05g007870.1 I 0.692
MYB117 Arabidopsis thaliana AT1G26780 I 0.692
Thhalv10008049m.g Eutrema salsugineum Thhalv10008049m.g I 0.692
Bo8g076540 Brassica oleracea Bo8g076540 I 0.692
Thhalv10019759m.g Eutrema salsugineum Thhalv10019759m.g I 0.692
PK20989.1 Cannabis sativa PK20989.1 I 0.692
VIT_14s0108g01010 Vitis vinifera VIT_14s0108g01010 I 0.692
Bo5g045110 Brassica oleracea Bo5g045110 I 0.692
chr2.CM0641.440.nd Lotus japonicus chr2.CM0641.440.nd I 0.692
Ca_16374 Cicer arietinum Ca_16374 I 0.692
GLYMA02G12105 Glycine max GLYMA02G12105 I 0.692
MTR_5g041570 Medicago truncatula MTR_5g041570 I 0.692
PGSC0003DMG400018427 Solanum tuberosum PGSC0003DMG400018427 I 0.692
Carubv10011887m.g Capsella rubella Carubv10011887m.g I 0.692
Cagra.1150s0023 Capsella grandiflora Cagra.1150s0023 I 0.692
MDP0000146675 Malus domestica MDP0000146675 I 0.692
MDP0000136541 Malus domestica MDP0000136541 I 0.692
Lus10026611.g Linum usitatissimum Lus10026611.g I 0.692
evm.TU.supercontig_1.43 Carica papaya evm.TU.supercontig_1.43 I 0.692
Lus10030452.g Linum usitatissimum Lus10030452.g I 0.692
AMTR_s00010p00264600 Amborella trichopoda AMTR_s00010p00264600 I 0.692
Bostr.12659s0321 Boechera stricta Bostr.12659s0321 I 0.692
mgf001214m Mimulus guttatus mgf001214m I 0.692
SapurV1A.0438s0100 Salix purpurea SapurV1A.0438s0100 I 0.692
Bra016285 Brassica rapa Bra016285 I 0.692
MYB117 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002287 I 0.692
GLYMA01G05980 Glycine max GLYMA01G05980 I 0.692
GLYMA20G04511 Glycine max GLYMA20G04511 I 0.692
SapurV1A.0149s0020 Salix purpurea SapurV1A.0149s0020 I 0.692
GLYMA07G35581 Glycine max GLYMA07G35581 I 0.692
gw1.200.30.1 Physcomitrella patens gw1.200.30.1 I 0.691
Pavir.J04678 Panicum virgatum Pavir.J04678 I 0.691
Si026751m.g Setaria italica Si026751m.g I 0.691
MTR_7g086960 Medicago truncatula MTR_7g086960 I 0.691
GSMUA_Achr10G05080_001 Musa acuminata GSMUA_Achr10G05080_001 I 0.691
Bo3g012780 Brassica oleracea Bo3g012780 I 0.691
Bra006422 Brassica rapa Bra006422 I 0.691
POPTR_0019s05740 Populus trichocarpa POPTR_0019s05740 I 0.690
gw1.2.29.1 Physcomitrella patens gw1.2.29.1 I 0.689
PGSC0003DMG400028119 Solanum tuberosum PGSC0003DMG400028119 I 0.689
Solyc10g081320.1 Solanum lycopersicum Solyc10g081320.1 I 0.689
Eucgr.A02150 Eucalyptus grandis Eucgr.A02150 I 0.689
LPERR08G13020 Leersia perrieri LPERR08G13020 I 0.688
Cagra.6254s0026 Capsella grandiflora Cagra.6254s0026 I 0.688
Carubv10001376m.g Capsella rubella Carubv10001376m.g I 0.688
Si011791m.g Setaria italica Si011791m.g I 0.687
SapurV1A.1660s0020 Salix purpurea SapurV1A.1660s0020 I 0.686
mgf006675m Mimulus guttatus mgf006675m I 0.686
SapurV1A.1416s0010 Salix purpurea SapurV1A.1416s0010 I 0.686
GSMUA_Achr9G17000_001 Musa acuminata GSMUA_Achr9G17000_001 I 0.684
Bra003995 Brassica rapa Bra003995 I 0.683
Pm006483 Prunus mume Pm006483 I 0.683
PRUPE_ppa025260mg Prunus persica PRUPE_ppa025260mg I 0.683
Aquca_002_00639 Aquilegia coerulea Aquca_002_00639 I 0.682
e_gw1.39.24.1 Physcomitrella patens e_gw1.39.24.1 I 0.682
Cucsa.189540 Cucumis sativus Cucsa.189540 I 0.682
GSMUA_Achr9G08480_001 Musa acuminata GSMUA_Achr9G08480_001 I 0.682
SapurV1A.0458s0070 Salix purpurea SapurV1A.0458s0070 I 0.681
Bo2g013970 Brassica oleracea Bo2g013970 I 0.681
e_gw1.219.38.1 Physcomitrella patens e_gw1.219.38.1 I 0.680
POPTR_0010s17470 Populus trichocarpa POPTR_0010s17470 I 0.680
SELMODRAFT_6282 Selaginella moellendorffii SELMODRAFT_6282 I 0.680
GLYMA03G00980 Glycine max GLYMA03G00980 I 0.680
SELMODRAFT_6284 Selaginella moellendorffii SELMODRAFT_6284 I 0.680
e_gw1.91.11.1 Physcomitrella patens e_gw1.91.11.1 I 0.680
GRMZM2G083239 Zea mays GRMZM2G083239 I 0.680
Ca_08179 Cicer arietinum Ca_08179 I 0.680
GSMUA_Achr5G27750_001 Musa acuminata GSMUA_Achr5G27750_001 I 0.679
MDP0000232291 Malus domestica MDP0000232291 I 0.678
MDP0000181178 Malus domestica MDP0000181178 I 0.678
GLYMA19G29670 Glycine max GLYMA19G29670 I 0.677
PK01212.1 Cannabis sativa PK01212.1 I 0.677
Aquca_022_00293 Aquilegia coerulea Aquca_022_00293 I 0.676
Bra002107 Brassica rapa Bra002107 I 0.675
F775_01864 Aegilops tauschii F775_01864 I 0.675
GRMZM5G803355 Zea mays GRMZM5G803355 I 0.674
PDK_20s1403571g003 Phoenix dactylifera PDK_20s1403571g003 I 0.674
30137.m000436 Ricinus communis 30137.m000436 I 0.674
cassava5849.m1 Manihot esculenta cassava5849.m1 I 0.674
Bo6g095400 Brassica oleracea Bo6g095400 I 0.674
Ciclev10023285m.g Citrus clementina Ciclev10023285m.g I 0.672
OMERI11G05160 Oryza meridionalis OMERI11G05160 I 0.671
OGLUM11G05960 Oryza glumaepatula OGLUM11G05960 I 0.671
TRIUR3_35269 Triticum urartu TRIUR3_35269 I 0.671
ONIVA11G06220 Oryza nivara ONIVA11G06220 I 0.671
MLOC_13062 Hordeum vulgare MLOC_13062 I 0.671
Traes_4DS_F6E1A4F88 Triticum aestivum Traes_4DS_F6E1A4F88 I 0.671
Traes_4BS_189002AB8 Triticum aestivum Traes_4BS_189002AB8 I 0.671
Solyc04g064540.2 Solanum lycopersicum Solyc04g064540.2 I 0.671
SELMODRAFT_127613 Selaginella moellendorffii SELMODRAFT_127613 I 0.671
gw1.76.8.1 Physcomitrella patens gw1.76.8.1 I 0.671
SELMODRAFT_80553 Selaginella moellendorffii SELMODRAFT_80553 I 0.671
OPUNC11G06210 Oryza punctata OPUNC11G06210 I 0.671
LPERR11G05690 Leersia perrieri LPERR11G05690 I 0.671
BRADI4G22730 Brachypodium distachyon BRADI4G22730 I 0.671
ORGLA11G0056700 Oryza glaberrima ORGLA11G0056700 I 0.671
BGIOSGA034994 Oryza indica BGIOSGA034994 I 0.671
ORUFI11G06340 Oryza rufipogon ORUFI11G06340 I 0.671
OS11G0207600 Oryza sativa OS11G0207600 I 0.671
Traes_4AL_7A841CAD2 Triticum aestivum Traes_4AL_7A841CAD2 I 0.671
SapurV1A.0171s0440 Salix purpurea SapurV1A.0171s0440 I 0.669
GSMUA_Achr6G17630_001 Musa acuminata GSMUA_Achr6G17630_001 I 0.669
LPERR03G26860 Leersia perrieri LPERR03G26860 I 0.669
OPUNC03G29370 Oryza punctata OPUNC03G29370 I 0.669
OS03G0720800 Oryza sativa OS03G0720800 I 0.669
OB03G39280 Oryza brachyantha OB03G39280 I 0.669
POPTR_0007s04140 Populus trichocarpa POPTR_0007s04140 I 0.669
BGIOSGA013472 Oryza indica BGIOSGA013472 I 0.669
BGIOSGA013471 Oryza indica BGIOSGA013471 I 0.669
Traes_3AL_825A1B8BD Triticum aestivum Traes_3AL_825A1B8BD I 0.669
ORGLA03G0409400 Oryza glaberrima ORGLA03G0409400 I 0.669
ORUFI03G33630 Oryza rufipogon ORUFI03G33630 I 0.669
OGLUM02G34940 Oryza glumaepatula OGLUM02G34940 I 0.669
OLONG_009506 Oryza longistaminata OLONG_009506 I 0.669
Gorai.013G196500 Gossypium raimondii Gorai.013G196500 I 0.669
OMERI03G28940 Oryza meridionalis OMERI03G28940 I 0.669
OBART03G32240 Oryza barthii OBART03G32240 I 0.669
ONIVA03G33740 Oryza nivara ONIVA03G33740 I 0.669
SELMODRAFT_38644 Selaginella moellendorffii SELMODRAFT_38644 I 0.668
SELMODRAFT_8484 Selaginella moellendorffii SELMODRAFT_8484 I 0.668
SapurV1A.2371s0030 Salix purpurea SapurV1A.2371s0030 I 0.666
POPTR_0007s01430 Populus trichocarpa POPTR_0007s01430 I 0.666
POPTR_0005s06410 Populus trichocarpa POPTR_0005s06410 I 0.666
SapurV1A.0118s0380 Salix purpurea SapurV1A.0118s0380 I 0.666
evm.TU.supercontig_480.4 Carica papaya evm.TU.supercontig_480.4 I 0.664
PK17670.1 Cannabis sativa PK17670.1 I 0.663
AMTR_s00024p00137930 Amborella trichopoda AMTR_s00024p00137930 I 0.663
gene09311-v1.0-hybrid Fragaria vesca gene09311-v1.0-hybrid I 0.663
PRUPE_ppa021779mg Prunus persica PRUPE_ppa021779mg I 0.663
cassava9262.m1 Manihot esculenta cassava9262.m1 I 0.663
TCM_013357 Theobroma cacao TCM_013357 I 0.663
30000.m000380 Ricinus communis 30000.m000380 I 0.663
Ciclev10021859m.g Citrus clementina Ciclev10021859m.g I 0.663
Gorai.007G253200 Gossypium raimondii Gorai.007G253200 I 0.663
GSMUA_Achr9G29090_001 Musa acuminata GSMUA_Achr9G29090_001 I 0.663
orange1.1g025697m.g Citrus sinensis orange1.1g025697m.g I 0.663
MDP0000265114 Malus domestica MDP0000265114 I 0.663
Lus10005683.g Linum usitatissimum Lus10005683.g I 0.663
SapurV1A.0074s0390 Salix purpurea SapurV1A.0074s0390 I 0.663