fgenesh2_kg.1__1502__AT1G13880.1 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.1__1502__AT1G13880.1 T270723_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__1502__AT1G13880.1 Myb 230 280

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra016722 Brassica rapa Bra016722 N 0.866
Carubv10009267m.g Capsella rubella Carubv10009267m.g N 0.864
AT1G13880 Arabidopsis thaliana AT1G13880 N 0.857
Bra026876 Brassica rapa Bra026876 N 0.855
Bostr.13671s0067 Boechera stricta Bostr.13671s0067 N 0.854
Bo8g065710 Brassica oleracea Bo8g065710 N 0.848
Cagra.3501s0113 Capsella grandiflora Cagra.3501s0113 N 0.775
Bo8g107180 Brassica oleracea Bo8g107180 N 0.771
Thhalv10005386m.g Eutrema salsugineum Thhalv10005386m.g N 0.767
Bra041096 Brassica rapa Bra041096 N 0.767
Bo7g081200 Brassica oleracea Bo7g081200 N 0.767
Ciclev10019841m.g Citrus clementina Ciclev10019841m.g N 0.739
Lus10004658.g Linum usitatissimum Lus10004658.g N 0.736
VIT_17s0000g06810 Vitis vinifera VIT_17s0000g06810 N 0.711
Carubv10019121m.g Capsella rubella Carubv10019121m.g N 0.687
Cagra.3545s0005 Capsella grandiflora Cagra.3545s0005 N 0.687
Gorai.007G039100 Gossypium raimondii Gorai.007G039100 N 0.682
AT2G03470 Arabidopsis thaliana AT2G03470 N 0.678
fgenesh2_kg.5__246__AT2G03470.1 Arabidopsis lyrata fgenesh2_kg.5__246__AT2G03470.1 N 0.678
GSMUA_Achr6G24610_001 Musa acuminata GSMUA_Achr6G24610_001 N 0.671
Lus10037097.g Linum usitatissimum Lus10037097.g N 0.670