CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA03G19470
(
Glycine max
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GLYMA03G19470
T271282_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB3R5
M07116_2.00
Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN
Dap-seq
OMalley et al.(2016)
MYB3R5_col_a
0.672
0.764
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA03G19470.2
Myb
57
103
RGGWTEEDDDTLTNAVQVFNGKNWKKIAEFLPGKSEVQCLHRWQKVL
GLYMA03G19470.2
Myb
109
155
KGPWTQEEDDKIIEMVSTHGPKKWSLISKSLPGRIGKQCRERWCNHL
GLYMA03G19470.2
Myb
161
206
KDPWTQEEELALMDAHRIHGNKWAEIAKVLHGRTDNSIKNHWNSSL
GLYMA03G19470.3
Myb
57
103
RGGWTEEDDDTLTNAVQVFNGKNWKKIAEFLPGKSEVQCLHRWQKVL
GLYMA03G19470.3
Myb
109
163
KGPWTQEEDDKIIEMVSTHGPKKWSLISKSLPGRIGKQCRERTDNSIKNHWNSSL
Links
Other
Myb/SANT
family TFs
Other
Glycine max
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy