GLYMA13G09010 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA13G09010 T271586_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.712 0.742
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.712 0.742
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.694 0.710
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.679 0.710
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.679 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G09010.1 Myb 11 58
GLYMA13G09010.1 Myb 64 109

Links

Other Myb/SANT family TFs
Other Glycine max TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA02G12242 Glycine max GLYMA02G12242 I 0.777
GLYMA02G12254 Glycine max GLYMA02G12254 I 0.720
Carubv10026801m.g Capsella rubella Carubv10026801m.g I 0.712
fgenesh1_pm.C_scaffold_8001114 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001114 I 0.712
Bra029033 Brassica rapa Bra029033 I 0.712
Cagra.1629s0007 Capsella grandiflora Cagra.1629s0007 I 0.712
Bo3g022210 Brassica oleracea Bo3g022210 I 0.712
MYB49 Arabidopsis thaliana AT5G54230 D 0.712
fgenesh1_pg.C_scaffold_8001466 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001466 I 0.712
Cucsa.148040 Cucumis sativus Cucsa.148040 I 0.705
Cla007838 Citrullus lanatus Cla007838 I 0.705
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.703
Bostr.26833s0846 Boechera stricta Bostr.26833s0846 I 0.703
orange1.1g035629m.g Citrus sinensis orange1.1g035629m.g I 0.702
Ciclev10017668m.g Citrus clementina Ciclev10017668m.g I 0.702
cassava39892.m1 Manihot esculenta cassava39892.m1 I 0.702
TCM_007904 Theobroma cacao TCM_007904 I 0.702
Eucgr.A01772 Eucalyptus grandis Eucgr.A01772 I 0.702
Solyc10g008700.1 Solanum lycopersicum Solyc10g008700.1 I 0.702
cassava2558.valid.m1 Manihot esculenta cassava2558.valid.m1 I 0.702
29983.m003281 Ricinus communis 29983.m003281 I 0.702
PGSC0003DMG400026628 Solanum tuberosum PGSC0003DMG400026628 I 0.702
AtMYB41 Vitis vinifera VIT_12s0134g00570 I 0.702
Solyc07g054840.2 Solanum lycopersicum Solyc07g054840.2 I 0.702
PGSC0003DMG400018331 Solanum tuberosum PGSC0003DMG400018331 I 0.702
Bra024224 Brassica rapa Bra024224 I 0.700
Bo7g111870 Brassica oleracea Bo7g111870 I 0.700
Thhalv10027463m.g Eutrema salsugineum Thhalv10027463m.g I 0.700
Bra026281 Brassica rapa Bra026281 I 0.700
Bo1g051220 Brassica oleracea Bo1g051220 I 0.700
Cagra.1225s0085 Capsella grandiflora Cagra.1225s0085 I 0.700
Bostr.7867s0646 Boechera stricta Bostr.7867s0646 I 0.700
Carubv10007810m.g Capsella rubella Carubv10007810m.g I 0.700
Gorai.005G206300 Gossypium raimondii Gorai.005G206300 I 0.698
Lus10039743.g Linum usitatissimum Lus10039743.g I 0.698
MDP0000468201 Malus domestica MDP0000468201 I 0.697
MDP0000710259 Malus domestica MDP0000710259 I 0.697
Gorai.008G151400 Gossypium raimondii Gorai.008G151400 I 0.696
AtMYB41 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001108 I 0.696
SapurV1A.0048s0210 Salix purpurea SapurV1A.0048s0210 I 0.694
AtMYB41 Arabidopsis thaliana AT4G28110 D 0.694
Thhalv10014125m.g Eutrema salsugineum Thhalv10014125m.g I 0.692
Pm028882 Prunus mume Pm028882 I 0.691
PGSC0003DMG400011250 Solanum tuberosum PGSC0003DMG400011250 I 0.691
SapurV1A.0151s0280 Salix purpurea SapurV1A.0151s0280 I 0.689
GLYMA06G45460 Glycine max GLYMA06G45460 I 0.689
Solyc10g005460.2 Solanum lycopersicum Solyc10g005460.2 I 0.689
Gorai.013G088400 Gossypium raimondii Gorai.013G088400 I 0.686
GLYMA12G11600 Glycine max GLYMA12G11600 I 0.685
Pm015547 Prunus mume Pm015547 I 0.684
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.684
Gorai.013G088200 Gossypium raimondii Gorai.013G088200 I 0.681
POPTR_0019s14070 Populus trichocarpa POPTR_0019s14070 I 0.680
MYB39 Arabidopsis thaliana AT4G17785 D 0.679
Thhalv10026921m.g Eutrema salsugineum Thhalv10026921m.g I 0.679
Bostr.30275s0243 Boechera stricta Bostr.30275s0243 I 0.679
MYB39 Arabidopsis lyrata fgenesh2_kg.7__2528__AT4G17785.1 I 0.679
Bra040181 Brassica rapa Bra040181 I 0.679
Bo1g017860 Brassica oleracea Bo1g017860 I 0.679
Gorai.013G088300 Gossypium raimondii Gorai.013G088300 I 0.678
chr3.CM0711.160.nd Lotus japonicus chr3.CM0711.160.nd I 0.677
SapurV1A.0417s0210 Salix purpurea SapurV1A.0417s0210 I 0.677
POPTR_0013s14480 Populus trichocarpa POPTR_0013s14480 I 0.677
Carubv10006864m.g Capsella rubella Carubv10006864m.g I 0.676
Cagra.3356s0071 Capsella grandiflora Cagra.3356s0071 I 0.676
Bo1g024170 Brassica oleracea Bo1g024170 I 0.675
mgf023669m Mimulus guttatus mgf023669m I 0.675
Bra013526 Brassica rapa Bra013526 I 0.675
mgf026502m Mimulus guttatus mgf026502m I 0.675
mgf025298m Mimulus guttatus mgf025298m I 0.675
TCM_011659 Theobroma cacao TCM_011659 I 0.674
SapurV1A.0063s0570 Salix purpurea SapurV1A.0063s0570 I 0.673
GRMZM2G024468 Zea mays GRMZM2G024468 I 0.673
POPTR_0010s17300 Populus trichocarpa POPTR_0010s17300 I 0.673
GLYMA19G02890 Glycine max GLYMA19G02890 I 0.672
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I 0.670
Ca_00232 Cicer arietinum Ca_00232 I 0.670
Gorai.008G179600 Gossypium raimondii Gorai.008G179600 I 0.670
GLYMA08G06440 Glycine max GLYMA08G06440 I 0.670
Cla010483 Citrullus lanatus Cla010483 I 0.670
MTR_2g011660 Medicago truncatula MTR_2g011660 I 0.670
GLYMA13G32090 Glycine max GLYMA13G32090 I 0.670
GLYMA15G07230 Glycine max GLYMA15G07230 I 0.670
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I 0.670
Cucsa.158170 Cucumis sativus Cucsa.158170 I 0.670
Pavir.J35695 Panicum virgatum Pavir.J35695 I 0.670
BRADI4G26180 Brachypodium distachyon BRADI4G26180 I 0.669
TCM_011658 Theobroma cacao TCM_011658 I 0.669
gene12564-v1.0-hybrid Fragaria vesca gene12564-v1.0-hybrid I 0.669
GLYMA01G06181 Glycine max GLYMA01G06181 I 0.668
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I 0.667
POPTR_0003s09300 Populus trichocarpa POPTR_0003s09300 I 0.667
Pm030488 Prunus mume Pm030488 I 0.666
PRUPE_ppa007438mg Prunus persica PRUPE_ppa007438mg I 0.666
ONIVA04G17140 Oryza nivara ONIVA04G17140 I 0.666
BRADI1G24887 Brachypodium distachyon BRADI1G24887 I 0.664
LPERR03G16640 Leersia perrieri LPERR03G16640 I 0.664
OPUNC03G18230 Oryza punctata OPUNC03G18230 I 0.664
Si030273m.g Setaria italica Si030273m.g I 0.664
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.664
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.664
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.663
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I 0.663
LjSGA_020545.1 Lotus japonicus LjSGA_020545.1 I 0.662
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.662
SapurV1A.0438s0010 Salix purpurea SapurV1A.0438s0010 I 0.662
orange1.1g016708m.g Citrus sinensis orange1.1g016708m.g I 0.662
PK22137.1 Cannabis sativa PK22137.1 I 0.662
Pavir.J33881 Panicum virgatum Pavir.J33881 I 0.662
Traes_2DL_C964675DE Triticum aestivum Traes_2DL_C964675DE I 0.662
OB08G23170 Oryza brachyantha OB08G23170 I 0.662
PGSC0003DMG400001339 Solanum tuberosum PGSC0003DMG400001339 I 0.662
POPTR_0017s12230 Populus trichocarpa POPTR_0017s12230 I 0.662
GSMUA_Achr7G18410_001 Musa acuminata GSMUA_Achr7G18410_001 I 0.662
GSMUA_Achr6G02550_001 Musa acuminata GSMUA_Achr6G02550_001 I 0.662
GLYMA13G05550 Glycine max GLYMA13G05550 I 0.662
GRMZM2G032655 Zea mays GRMZM2G032655 I 0.662
GSMUA_Achr5G23240_001 Musa acuminata GSMUA_Achr5G23240_001 I 0.662
Gorai.012G052500 Gossypium raimondii Gorai.012G052500 I 0.662
Si010352m.g Setaria italica Si010352m.g I 0.662
cassava360.valid.m1 Manihot esculenta cassava360.valid.m1 I 0.662
Ciclev10011948m.g Citrus clementina Ciclev10011948m.g I 0.662
evm.TU.supercontig_14.102 Carica papaya evm.TU.supercontig_14.102 I 0.662
cassava1759.valid.m1 Manihot esculenta cassava1759.valid.m1 I 0.662
TRIUR3_25784 Triticum urartu TRIUR3_25784 I 0.662
BRADI5G12417 Brachypodium distachyon BRADI5G12417 I 0.662
Si013994m.g Setaria italica Si013994m.g I 0.662
TCM_018639 Theobroma cacao TCM_018639 I 0.662
F775_26161 Aegilops tauschii F775_26161 I 0.662
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.661
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.661