GSMUA_Achr3G16490_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr3G16490_001 T272397_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB52
M00871_2.00
Arabidopsis thaliana
NNNAMCNDNN

NNHNGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB52
0.779 0.835
MYB52
M07007_2.00
Arabidopsis thaliana
TAACGGTNHHD

HDDNACCGTTA
Dap-seq
OMalley et al.(2016)
MYB52_col_a
0.779 0.835
MYB56
M07130_2.00
Arabidopsis thaliana
DDHNHTAACKGWHWH

DWDWCMGTTADNDHH
Dap-seq
OMalley et al.(2016)
MYB56_col_a
0.756 0.813
MYB56
M07131_2.00
Arabidopsis thaliana
DNNHTAACGGWHWHD

HDWDWCCGTTADNNH
Dap-seq
OMalley et al.(2016)
MYB56_colamp_a
0.756 0.813
MYB105
M07031_2.00
Arabidopsis thaliana
TAACGGTWWHDDW

WHHDWWACCGTTA
Dap-seq
OMalley et al.(2016)
MYB105_col_a
0.744 0.802
MYB105
M07032_2.00
Arabidopsis thaliana
NNDWHDHTAACGGWWWH

DWWWCCGTTADHDWHNN
Dap-seq
OMalley et al.(2016)
MYB105_colamp_a
0.744 0.802
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P16490_001 Myb 20 66
GSMUA_Achr3P16490_001 Myb 72 115

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

385 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R001830 Calypte anna Aan_R001830 N 0.000
ENSAMEG00000018175 Ailuropoda melanoleuca ENSAMEG00000018175 N 0.000
MXD3 Bos taurus ENSBTAG00000005010 N 0.000
MXD3 Canis familiaris ENSCAFG00000016437 N 0.000
ENSCJAG00000006943 Callithrix jacchus ENSCJAG00000006943 N 0.000
ENSCSAG00000008875 Chlorocebus sabaeus ENSCSAG00000008875 N 0.000
MXD3 Dasypus novemcinctus ENSDNOG00000017403 N 0.000
MXD4 Equus caballus ENSECAG00000002580 N 0.000
MXD3 Equus caballus ENSECAG00000021155 N 0.000
MXD3 Erinaceus europaeus ENSEEUG00000015798 N 0.000
MXD3 Echinops telfairi ENSETEG00000010972 N 0.000
ENSFALG00000000117 Ficedula albicollis ENSFALG00000000117 N 0.000
MXD3 Felis catus ENSFCAG00000001533 N 0.000
MXD3 Homo sapiens ENSG00000213347 N 0.000
ENSGGOG00000011764 Gorilla gorilla ENSGGOG00000011764 N 0.000
MXD3 Loxodonta africana ENSLAFG00000021836 N 0.000
ENSMEUG00000013427 Macropus eugenii ENSMEUG00000013427 N 0.000
ENSMLUG00000007019 Myotis lucifugus ENSMLUG00000007019 N 0.000
ENSMMUG00000009047 Macaca mulatta ENSMMUG00000009047 N 0.000
ENSMMUP00000033662 Macaca fascicularis ENSMMUP00000033662 N 0.000
MXD4 Monodelphis domestica ENSMODG00000004033 N 0.000
MXD3 Monodelphis domestica ENSMODG00000004791 N 0.000
ENSMPUG00000012200 Mustela putorius furo ENSMPUG00000012200 N 0.000
Mxd3 Mus musculus ENSMUSG00000021485 N 0.000
ENSNLEG00000012726 Nomascus leucogenys ENSNLEG00000012726 N 0.000
ENSOARG00000004235 Ovis aries ENSOARG00000004235 N 0.000
MXD4 Oryctolagus cuniculus ENSOCUG00000005063 N 0.000
MXD3 Oryctolagus cuniculus ENSOCUG00000022519 N 0.000
MXD3 Otolemur garnettii ENSOGAG00000032370 N 0.000
MXD3 Ochotona princeps ENSOPRG00000002125 N 0.000
ENSP00000389716-D1 Bos grunniens ENSP00000389716-D1 N 0.000
ENSPANG00000007888 Papio anubis ENSPANG00000007888 N 0.000
MXD3 Pan troglodytes ENSPTRG00000034491 N 0.000
MXD3 Pteropus vampyrus ENSPVAG00000003828 N 0.000
Rab24 Rattus norvegicus ENSRNOG00000016539 N 0.000
ENSSHAG00000011878 Sarcophilus harrisii ENSSHAG00000011878 N 0.000
ENSSHAG00000013431 Sarcophilus harrisii ENSSHAG00000013431 N 0.000
ENSSTOG00000002697 Ictidomys tridecemlineatus ENSSTOG00000002697 N 0.000
MXD3 Tursiops truncatus ENSTTRG00000009572 N 0.000
Myotis_brandtii_MXD3_10032506 Myotis brandtii Myotis_brandtii_MXD3_10032506 N 0.000
mxd3 Xenopus tropicalis XB-GENE-867571 N 0.000
mxd3.L Xenopus laevis XB-GENE-867580 N 0.000