CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr4G19990_001
(
Musa acuminata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GSMUA_Achr4G19990_001
T272437_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.661
0.785
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr4P19990_001
Myb
6
53
RGPWTVEEDLVLIKYVTEHGDGQWNALARLAGLKRTGKSCRLRWLNYL
GSMUA_Achr4P19990_001
Myb
59
104
RGNITPDEQLLILELQSRWGNRWSKIARCLPGRTDNEIKNYWRTRV
Links
Other
Myb/SANT
family TFs
Other
Musa acuminata
TFs
226 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_AchrUn_randomG08600_001
Musa acuminata
GSMUA_AchrUn_randomG08600_001
I
0.761
GSMUA_Achr7G05570_001
Musa acuminata
GSMUA_Achr7G05570_001
I
0.754
Traes_5BS_95A52A87F
Triticum aestivum
Traes_5BS_95A52A87F
I
0.743
MLOC_6821
Hordeum vulgare
MLOC_6821
I
0.743
F775_08129
Aegilops tauschii
F775_08129
I
0.743
Traes_5DS_DE2C70E4C
Triticum aestivum
Traes_5DS_DE2C70E4C
I
0.743
GSMUA_AchrUn_randomG00010_001
Musa acuminata
GSMUA_AchrUn_randomG00010_001
I
0.740
Cla022143
Citrullus lanatus
Cla022143
I
0.737
Cucsa.252400
Cucumis sativus
Cucsa.252400
I
0.737
GSMUA_Achr3G12730_001
Musa acuminata
GSMUA_Achr3G12730_001
I
0.735
BRADI4G04627
Brachypodium distachyon
BRADI4G04627
I
0.728
Pavir.J39490
Panicum virgatum
Pavir.J39490
I
0.726
Pavir.J28445
Panicum virgatum
Pavir.J28445
I
0.726
Si035722m.g
Setaria italica
Si035722m.g
I
0.726
Sb01g037110
Sorghum bicolor
Sb01g037110
I
0.726
GSMUA_Achr11G20830_001
Musa acuminata
GSMUA_Achr11G20830_001
I
0.725
GSMUA_Achr8G10800_001
Musa acuminata
GSMUA_Achr8G10800_001
I
0.723
GLYMA10G01340
Glycine max
GLYMA10G01340
I
0.721
GRMZM2G134279
Zea mays
GRMZM2G134279
I
0.720
GSMUA_Achr9G16640_001
Musa acuminata
GSMUA_Achr9G16640_001
I
0.720
GSMUA_Achr1G24960_001
Musa acuminata
GSMUA_Achr1G24960_001
I
0.718
Pavir.Bb03718
Panicum virgatum
Pavir.Bb03718
I
0.717
ONIVA01G14890
Oryza nivara
ONIVA01G14890
I
0.716
ORUFI01G13460
Oryza rufipogon
ORUFI01G13460
I
0.716
OS01G0298400
Oryza sativa
OS01G0298400
I
0.716
Si026574m.g
Setaria italica
Si026574m.g
I
0.716
Pavir.Ha00303
Panicum virgatum
Pavir.Ha00303
I
0.716
OPUNC01G12250
Oryza punctata
OPUNC01G12250
I
0.716
ORGLA01G0104900
Oryza glaberrima
ORGLA01G0104900
I
0.716
MLOC_68593
Hordeum vulgare
MLOC_68593
I
0.716
OBART01G12500
Oryza barthii
OBART01G12500
I
0.716
OGLUM01G13990
Oryza glumaepatula
OGLUM01G13990
I
0.716
ORGLA03G0145100
Oryza glaberrima
ORGLA03G0145100
I
0.715
OB03G25040
Oryza brachyantha
OB03G25040
I
0.715
GSMUA_Achr5G21090_001
Musa acuminata
GSMUA_Achr5G21090_001
I
0.715
LPERR03G13320
Leersia perrieri
LPERR03G13320
I
0.715
MYB2
Oryza sativa
OS03G0315400
I
0.715
BGIOSGA010857
Oryza indica
BGIOSGA010857
I
0.715
OB05G33720
Oryza brachyantha
OB05G33720
I
0.714
Traes_1AL_91299CB97
Triticum aestivum
Traes_1AL_91299CB97
I
0.713
GSMUA_Achr8G29910_001
Musa acuminata
GSMUA_Achr8G29910_001
I
0.712
GSMUA_Achr11G16130_001
Musa acuminata
GSMUA_Achr11G16130_001
I
0.710
PGSC0003DMG401004611
Solanum tuberosum
PGSC0003DMG401004611
I
0.709
GLYMA07G36430
Glycine max
GLYMA07G36430
I
0.708
Solyc12g099120.1
Solanum lycopersicum
Solyc12g099120.1
I
0.707
GSMUA_Achr3G08370_001
Musa acuminata
GSMUA_Achr3G08370_001
I
0.707
MTR_1g086530
Medicago truncatula
MTR_1g086530
I
0.703
GLYMA03G38070
Glycine max
GLYMA03G38070
I
0.703
PRUPE_ppa015973mg
Prunus persica
PRUPE_ppa015973mg
I
0.703
Pm012912
Prunus mume
Pm012912
I
0.703
Eucgr.B03985
Eucalyptus grandis
Eucgr.B03985
I
0.703
GRMZM2G070849
Zea mays
GRMZM2G070849
I
0.702
MTR_2g033170
Medicago truncatula
MTR_2g033170
I
0.701
GLYMA09G03690
Glycine max
GLYMA09G03690
I
0.701
Carubv10026871m.g
Capsella rubella
Carubv10026871m.g
I
0.701
OB11G27320
Oryza brachyantha
OB11G27320
I
0.701
JAMYB
Oryza sativa
OS11G0684000
I
0.701
mgf015990m
Mimulus guttatus
mgf015990m
I
0.701
Cagra.3474s0016
Capsella grandiflora
Cagra.3474s0016
I
0.701
Ca_08069
Cicer arietinum
Ca_08069
I
0.701
PK21537.1
Cannabis sativa
PK21537.1
I
0.701
Aquca_003_00440
Aquilegia coerulea
Aquca_003_00440
I
0.701
GLYMA15G14620
Glycine max
GLYMA15G14620
I
0.701
ORUFI11G24630
Oryza rufipogon
ORUFI11G24630
I
0.701
Bostr.15774s0093
Boechera stricta
Bostr.15774s0093
I
0.701
ORGLA12G0140200
Oryza glaberrima
ORGLA12G0140200
I
0.698
ONIVA07G26740
Oryza nivara
ONIVA07G26740
I
0.698
ORGLA07G0213800
Oryza glaberrima
ORGLA07G0213800
I
0.698
OPUNC07G25360
Oryza punctata
OPUNC07G25360
I
0.698
gene05018-v1.0-hybrid
Fragaria vesca
gene05018-v1.0-hybrid
I
0.698
OB07G32480
Oryza brachyantha
OB07G32480
I
0.698
ORUFI12G17730
Oryza rufipogon
ORUFI12G17730
I
0.698
OS07G0688200
Oryza sativa
OS07G0688200
I
0.698
OB12G22880
Oryza brachyantha
OB12G22880
I
0.698
OGLUM07G26960
Oryza glumaepatula
OGLUM07G26960
I
0.698
OBART07G26990
Oryza barthii
OBART07G26990
I
0.698
ORUFI07G27930
Oryza rufipogon
ORUFI07G27930
I
0.698
OMERI07G23590
Oryza meridionalis
OMERI07G23590
I
0.698
BGIOSGA026430
Oryza indica
BGIOSGA026430
I
0.698
Pavir.J03771
Panicum virgatum
Pavir.J03771
I
0.698
VIT_05s0077g00500
Vitis vinifera
VIT_05s0077g00500
I
0.698
Sb08g018370
Sorghum bicolor
Sb08g018370
I
0.698
GRMZM2G143046
Zea mays
GRMZM2G143046
I
0.698
Si022831m.g
Setaria italica
Si022831m.g
I
0.698
Si022474m.g
Setaria italica
Si022474m.g
I
0.698
PRUPE_ppa025672mg
Prunus persica
PRUPE_ppa025672mg
I
0.698
Pavir.Cb00499
Panicum virgatum
Pavir.Cb00499
I
0.698
Solyc01g057910.2
Solanum lycopersicum
Solyc01g057910.2
I
0.698
TRIUR3_25116
Triticum urartu
TRIUR3_25116
I
0.698
MDP0000274300
Malus domestica
MDP0000274300
I
0.698
BGIOSGA035999
Oryza indica
BGIOSGA035999
I
0.698
GLYMA17G04171
Glycine max
GLYMA17G04171
I
0.697
Traes_4BS_F83CB32DD
Triticum aestivum
Traes_4BS_F83CB32DD
I
0.696
Traes_4DS_2A5B4C4C4
Triticum aestivum
Traes_4DS_2A5B4C4C4
I
0.696
POPTR_0014s11230
Populus trichocarpa
POPTR_0014s11230
I
0.696
F775_17094
Aegilops tauschii
F775_17094
I
0.696
Cla019255
Citrullus lanatus
Cla019255
I
0.695
GSMUA_Achr11G04930_001
Musa acuminata
GSMUA_Achr11G04930_001
I
0.695
Sb02g043420
Sorghum bicolor
Sb02g043420
I
0.694
Lus10009037.g
Linum usitatissimum
Lus10009037.g
I
0.694
Pavir.Ca00769
Panicum virgatum
Pavir.Ca00769
I
0.694
LPERR01G11480
Leersia perrieri
LPERR01G11480
I
0.694
Si030584m.g
Setaria italica
Si030584m.g
I
0.693
Gorai.011G203900
Gossypium raimondii
Gorai.011G203900
I
0.692
evm.TU.contig_30289.2
Carica papaya
evm.TU.contig_30289.2
I
0.692
Cucsa.128620
Cucumis sativus
Cucsa.128620
I
0.692
TCM_021433
Theobroma cacao
TCM_021433
I
0.692
Thhalv10004588m.g
Eutrema salsugineum
Thhalv10004588m.g
I
0.692
Gorai.005G068900
Gossypium raimondii
Gorai.005G068900
I
0.692
Traes_4AS_E4294BADC
Triticum aestivum
Traes_4AS_E4294BADC
I
0.691
F775_14949
Aegilops tauschii
F775_14949
I
0.691
MLOC_17928
Hordeum vulgare
MLOC_17928
I
0.691
BRADI1G64140
Brachypodium distachyon
BRADI1G64140
I
0.691
Traes_4DL_9023F3504
Triticum aestivum
Traes_4DL_9023F3504
I
0.691
PK10896.1
Cannabis sativa
PK10896.1
I
0.689
cassava33046.m1
Manihot esculenta
cassava33046.m1
I
0.689
Sb09g002675
Sorghum bicolor
Sb09g002675
I
0.689
GRMZM2G160840
Zea mays
GRMZM2G160840
I
0.689
GRMZM2G001824
Zea mays
GRMZM2G001824
I
0.689
Bo7g092890
Brassica oleracea
Bo7g092890
I
0.689
Bra010021
Brassica rapa
Bra010021
I
0.689
PGSC0003DMG400008761
Solanum tuberosum
PGSC0003DMG400008761
I
0.689
Bra010022
Brassica rapa
Bra010022
I
0.689
Cucsa.213510
Cucumis sativus
Cucsa.213510
I
0.689
mgf013798m
Mimulus guttatus
mgf013798m
I
0.687
Bra020624
Brassica rapa
Bra020624
I
0.687
Bo2g151810
Brassica oleracea
Bo2g151810
I
0.687
GRMZM2G131442
Zea mays
GRMZM2G131442
I
0.686
Sb05g026820
Sorghum bicolor
Sb05g026820
I
0.686
Sb03g012310
Sorghum bicolor
Sb03g012310
I
0.686
ORUFI01G01910
Oryza rufipogon
ORUFI01G01910
I
0.684
30076.m004607
Ricinus communis
30076.m004607
I
0.684
MDP0000167107
Malus domestica
MDP0000167107
I
0.684
BRADI2G11430
Brachypodium distachyon
BRADI2G11430
I
0.684
OS01G0128000
Oryza sativa
OS01G0128000
I
0.684
BGIOSGA018863
Oryza indica
BGIOSGA018863
I
0.683
ORGLA05G0022200
Oryza glaberrima
ORGLA05G0022200
I
0.683
ORUFI05G02420
Oryza rufipogon
ORUFI05G02420
I
0.683
Pm008425
Prunus mume
Pm008425
I
0.683
ONIVA05G02220
Oryza nivara
ONIVA05G02220
I
0.683
OGLUM05G02350
Oryza glumaepatula
OGLUM05G02350
I
0.683
OB05G12230
Oryza brachyantha
OB05G12230
I
0.683
GRMZM2G330475
Zea mays
GRMZM2G330475
I
0.683
OPUNC05G02190
Oryza punctata
OPUNC05G02190
I
0.683
GLYMA19G40670
Glycine max
GLYMA19G40670
I
0.682
AtMYB78
Arabidopsis thaliana
AT5G49620
I
0.682
OB01G22230
Oryza brachyantha
OB01G22230
I
0.682
AMTR_s00003p00219710
Amborella trichopoda
AMTR_s00003p00219710
I
0.682
Cla015409
Citrullus lanatus
Cla015409
I
0.681
GRMZM2G047600
Zea mays
GRMZM2G047600
I
0.681
GLYMA19G40650
Glycine max
GLYMA19G40650
I
0.681
evm.TU.supercontig_145.21
Carica papaya
evm.TU.supercontig_145.21
I
0.680
BRADI2G38560
Brachypodium distachyon
BRADI2G38560
I
0.677
Pavir.Ba00256
Panicum virgatum
Pavir.Ba00256
I
0.677
MTR_4g123040
Medicago truncatula
MTR_4g123040
I
0.677
Aquca_002_00135
Aquilegia coerulea
Aquca_002_00135
I
0.676
TCM_004878
Theobroma cacao
TCM_004878
I
0.676
MYB78
Arabidopsis lyrata
fgenesh2_kg.8__837__AT5G49620.1
I
0.675
Gorai.004G146000
Gossypium raimondii
Gorai.004G146000
I
0.675
Cla008412
Citrullus lanatus
Cla008412
I
0.675
LPERR07G23760
Leersia perrieri
LPERR07G23760
I
0.674
Eucgr.H04082
Eucalyptus grandis
Eucgr.H04082
I
0.674
GSMUA_Achr9G07000_001
Musa acuminata
GSMUA_Achr9G07000_001
I
0.673
Traes_1AS_36AF74187
Triticum aestivum
Traes_1AS_36AF74187
I
0.673
Solyc12g099130.1
Solanum lycopersicum
Solyc12g099130.1
I
0.673
cassava39393.m1
Manihot esculenta
cassava39393.m1
I
0.672
Sb09g002680
Sorghum bicolor
Sb09g002680
I
0.672
BRADI4G09900
Brachypodium distachyon
BRADI4G09900
I
0.672
Solyc05g053330.2
Solanum lycopersicum
Solyc05g053330.2
I
0.671
Gorai.006G080800
Gossypium raimondii
Gorai.006G080800
I
0.671
Traes_2AS_25C93FD29
Triticum aestivum
Traes_2AS_25C93FD29
I
0.670
Traes_2BS_E8D2BD66E
Triticum aestivum
Traes_2BS_E8D2BD66E
I
0.670
Traes_2AS_25C93FD291
Triticum aestivum
Traes_2AS_25C93FD291
I
0.670
Traes_2DS_61B920833
Triticum aestivum
Traes_2DS_61B920833
I
0.670
BGIOSGA020382
Oryza indica
BGIOSGA020382
I
0.669
evm.TU.supercontig_49.71
Carica papaya
evm.TU.supercontig_49.71
I
0.669
POPTR_0010s15970
Populus trichocarpa
POPTR_0010s15970
I
0.668
SapurV1A.0050s0080
Salix purpurea
SapurV1A.0050s0080
I
0.668
SapurV1A.0114s0410
Salix purpurea
SapurV1A.0114s0410
I
0.668
orange1.1g019911m.g
Citrus sinensis
orange1.1g019911m.g
I
0.668
SapurV1A.6591s0010
Salix purpurea
SapurV1A.6591s0010
I
0.668
Ciclev10005387m.g
Citrus clementina
Ciclev10005387m.g
I
0.668
POPTR_0008s10080
Populus trichocarpa
POPTR_0008s10080
I
0.668
GRMZM2G425427
Zea mays
GRMZM2G425427
I
0.668
Cucsa.300720
Cucumis sativus
Cucsa.300720
I
0.667
Cla017610
Citrullus lanatus
Cla017610
I
0.667
GSMUA_Achr6G27290_001
Musa acuminata
GSMUA_Achr6G27290_001
I
0.667
GSMUA_Achr6G09760_001
Musa acuminata
GSMUA_Achr6G09760_001
I
0.666
PGSC0003DMG400027157
Solanum tuberosum
PGSC0003DMG400027157
I
0.666
Carubv10021411m.g
Capsella rubella
Carubv10021411m.g
I
0.666
Cagra.1111s0025
Capsella grandiflora
Cagra.1111s0025
I
0.666
Lus10037818.g
Linum usitatissimum
Lus10037818.g
I
0.665
Lus10017096.g
Linum usitatissimum
Lus10017096.g
I
0.665
Pavir.Ea00964
Panicum virgatum
Pavir.Ea00964
I
0.665
GSMUA_Achr1G27270_001
Musa acuminata
GSMUA_Achr1G27270_001
I
0.665
POPTR_0008s17350
Populus trichocarpa
POPTR_0008s17350
I
0.665
Si002446m.g
Setaria italica
Si002446m.g
I
0.665
Bra040274
Brassica rapa
Bra040274
I
0.664
Bo1g147890
Brassica oleracea
Bo1g147890
I
0.664
OMERI05G02430
Oryza meridionalis
OMERI05G02430
I
0.664
Gorai.006G265800
Gossypium raimondii
Gorai.006G265800
I
0.664
GRMZM2G158700
Zea mays
GRMZM2G158700
I
0.664
GLYMA10G01330
Glycine max
GLYMA10G01330
I
0.663
Thhalv10004857m.g
Eutrema salsugineum
Thhalv10004857m.g
I
0.662
Bostr.0556s0458
Boechera stricta
Bostr.0556s0458
I
0.662
Carubv10018700m.g
Capsella rubella
Carubv10018700m.g
I
0.662
Eucgr.K03562
Eucalyptus grandis
Eucgr.K03562
I
0.662
Bra039067
Brassica rapa
Bra039067
I
0.662
MYB21
Arabidopsis thaliana
AT3G27810
I
0.662
Bo9g008370
Brassica oleracea
Bo9g008370
I
0.662
Bo7g085930
Brassica oleracea
Bo7g085930
I
0.662
Bra025300
Brassica rapa
Bra025300
I
0.662
Cagra.11216s0001
Capsella grandiflora
Cagra.11216s0001
I
0.662
ATMYB21
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5000445
I
0.662
MYB108
Arabidopsis thaliana
AT3G06490
D
0.661
MYB108
Arabidopsis lyrata
fgenesh2_kg.3__656__AT3G06490.1
I
0.661
Ca_03053
Cicer arietinum
Ca_03053
I
0.661
Cagra.9553s0006
Capsella grandiflora
Cagra.9553s0006
I
0.661
Bo5g143460
Brassica oleracea
Bo5g143460
I
0.661
Bostr.2570s0008
Boechera stricta
Bostr.2570s0008
I
0.661
Carubv10014195m.g
Capsella rubella
Carubv10014195m.g
I
0.661
POPTR_0002s19250
Populus trichocarpa
POPTR_0002s19250
I
0.661
Gorai.007G121000
Gossypium raimondii
Gorai.007G121000
I
0.661
Bra001202
Brassica rapa
Bra001202
I
0.661
ATMYB2
Vitis vinifera
VIT_07s0005g01950
I
0.661
Bra029582
Brassica rapa
Bra029582
I
0.661