LPERR04G19390 (Leersia perrieri)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 LPERR04G19390 T273714_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.704 0.777
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.704 0.777
AtMYB10
M07081_2.00 		Arabidopsis thaliana
YYYACCWAMCHHHHNH
DNDDDDGKTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB10_col_a 		0.703 0.755
AtMYB10
M07082_2.00 		Arabidopsis thaliana
NYYYACCWAMCHHH
DDDGKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB10_colamp_a 		0.703 0.755
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.676 0.745
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.676 0.745
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.670 0.766
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.670 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR04G19390.1 Myb 16 63
LPERR04G19390.1 Myb 69 131

Links

Other Myb/SANT family TFs
Other Leersia perrieri TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB02G35920 Oryza brachyantha OB02G35920 I 0.861
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.858
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.858
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.854
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.850
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.850
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.850
OBART04G23680 Oryza barthii OBART04G23680 I 0.850
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.850
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.850
OS04G0594100 Oryza sativa OS04G0594100 I 0.850
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.850
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.850
OS02G0695200 Oryza sativa OS02G0695200 I 0.849
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I 0.849
OLONG_022853 Oryza longistaminata OLONG_022853 I 0.849
OBART02G28790 Oryza barthii OBART02G28790 I 0.849
OMERI02G27850 Oryza meridionalis OMERI02G27850 I 0.849
BGIOSGA005798 Oryza indica BGIOSGA005798 I 0.849
ONIVA02G31530 Oryza nivara ONIVA02G31530 I 0.849
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I 0.849
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.846
Si010384m.g Setaria italica Si010384m.g I 0.843
Traes_6DL_8BAAC240D Triticum aestivum Traes_6DL_8BAAC240D I 0.837
MLOC_71418 Hordeum vulgare MLOC_71418 I 0.837
Traes_6AL_C13753B31 Triticum aestivum Traes_6AL_C13753B31 I 0.837
F775_14744 Aegilops tauschii F775_14744 I 0.837
TRIUR3_14330 Triticum urartu TRIUR3_14330 I 0.837
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I 0.832
GRMZM2G097638 Zea mays GRMZM2G097638 I 0.823
GRMZM2G097636 Zea mays GRMZM2G097636 I 0.823
OB04G30570 Oryza brachyantha OB04G30570 I 0.820
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.817
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I 0.809
Si017704m.g Setaria italica Si017704m.g I 0.807
GRMZM5G833253 Zea mays GRMZM5G833253 I 0.805
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I 0.803
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I 0.803
F775_18231 Aegilops tauschii F775_18231 I 0.803
TRIUR3_18702 Triticum urartu TRIUR3_18702 I 0.803
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I 0.803
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I 0.803
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I 0.802
Pavir.J10932 Panicum virgatum Pavir.J10932 I 0.799
MLOC_53640 Hordeum vulgare MLOC_53640 I 0.794
Pavir.Gb00587 Panicum virgatum Pavir.Gb00587 I 0.793
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I 0.789
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I 0.778
Traes_2BL_34A0848F2 Triticum aestivum Traes_2BL_34A0848F2 I 0.773
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I 0.763
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I 0.762
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I 0.761
GSMUA_Achr11G17870_001 Musa acuminata GSMUA_Achr11G17870_001 I 0.752
Gorai.002G106300 Gossypium raimondii Gorai.002G106300 I 0.747
TCM_032927 Theobroma cacao TCM_032927 I 0.739
POPTR_0007s08190 Populus trichocarpa POPTR_0007s08190 I 0.739
POPTR_0005s09930 Populus trichocarpa POPTR_0005s09930 I 0.735
orange1.1g045411m.g Citrus sinensis orange1.1g045411m.g I 0.732
Ciclev10005102m.g Citrus clementina Ciclev10005102m.g I 0.732
30169.m006322 Ricinus communis 30169.m006322 I 0.729
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.728
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.727
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.725
SapurV1A.0284s0110 Salix purpurea SapurV1A.0284s0110 I 0.724
GLYMA15G41255 Glycine max GLYMA15G41255 I 0.724
VIT_19s0085g00050 Vitis vinifera VIT_19s0085g00050 I 0.722
Bo6g081140 Brassica oleracea Bo6g081140 I 0.721
Bra003619 Brassica rapa Bra003619 I 0.721
gene29961-v1.0-hybrid Fragaria vesca gene29961-v1.0-hybrid I 0.719
Gorai.004G269400 Gossypium raimondii Gorai.004G269400 I 0.718
Traes_2BL_0501BC320 Triticum aestivum Traes_2BL_0501BC320 I 0.718
Cucsa.118450 Cucumis sativus Cucsa.118450 I 0.718
Thhalv10021926m.g Eutrema salsugineum Thhalv10021926m.g I 0.717
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I 0.716
PK03488.1 Cannabis sativa PK03488.1 I 0.716
Carubv10020691m.g Capsella rubella Carubv10020691m.g I 0.716
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.713
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.713
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.713
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.713
PGSC0003DMG400038913 Solanum tuberosum PGSC0003DMG400038913 I 0.712
Pm011057 Prunus mume Pm011057 I 0.710
PRUPE_ppa026315mg Prunus persica PRUPE_ppa026315mg I 0.710
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.710
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.708
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.708
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.708
MDP0000133542 Malus domestica MDP0000133542 I 0.706
MYB58 Arabidopsis thaliana AT1G16490 D 0.704
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.704
Lus10041145.g Linum usitatissimum Lus10041145.g I 0.704
TCM_020889 Theobroma cacao TCM_020889 I 0.703
PDK_20s1427521g001 Phoenix dactylifera PDK_20s1427521g001 I 0.703
PK20358.1 Cannabis sativa PK20358.1 I 0.703
Bostr.3640s0057 Boechera stricta Bostr.3640s0057 I 0.703
Carubv10016289m.g Capsella rubella Carubv10016289m.g I 0.703
AtMYB10 Arabidopsis lyrata fgenesh2_kg.3__1346__AT3G12820.1 I 0.703
AtMYB10 Arabidopsis thaliana AT3G12820 D 0.703
Cagra.5641s0047 Capsella grandiflora Cagra.5641s0047 I 0.703
MTR_2g067420 Medicago truncatula MTR_2g067420 I 0.703
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.700
Bo6g122640 Brassica oleracea Bo6g122640 I 0.700
GLYMA08G17861 Glycine max GLYMA08G17861 I 0.700
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.699
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.697
Bra026720 Brassica rapa Bra026720 I 0.696
Ca_12130 Cicer arietinum Ca_12130 I 0.696
Bo8g105490 Brassica oleracea Bo8g105490 I 0.696
Bo3g065150 Brassica oleracea Bo3g065150 I 0.696
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.695
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.695
OS10G0478300 Oryza sativa OS10G0478300 I 0.695
BRADI5G15760 Brachypodium distachyon BRADI5G15760 I 0.695
Cla013669 Citrullus lanatus Cla013669 I 0.694
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.694
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.692
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.691
cassava35427.valid.m1 Manihot esculenta cassava35427.valid.m1 I 0.690
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.690
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.690
Bostr.7128s0256 Boechera stricta Bostr.7128s0256 I 0.688
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.687
GLYMA02G00820 Glycine max GLYMA02G00820 I 0.687
GLYMA10G00930 Glycine max GLYMA10G00930 I 0.687
GLYMA02G12254 Glycine max GLYMA02G12254 I 0.687
Pavir.Ia01684 Panicum virgatum Pavir.Ia01684 I 0.686
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.686
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.686
Si040527m.g Setaria italica Si040527m.g I 0.686
Sb01g019270 Sorghum bicolor Sb01g019270 I 0.686
Lus10021871.g Linum usitatissimum Lus10021871.g I 0.685
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.684
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.684
Pavir.J09313 Panicum virgatum Pavir.J09313 I 0.683
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.683
SapurV1A.0085s0540 Salix purpurea SapurV1A.0085s0540 I 0.682
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.682
chr6.CM1613.30.nc Lotus japonicus chr6.CM1613.30.nc I 0.681
Lus10031758.g Linum usitatissimum Lus10031758.g I 0.681
Bra001472 Brassica rapa Bra001472 I 0.681
PGSC0003DMG400011243 Solanum tuberosum PGSC0003DMG400011243 I 0.680
Cagra.0998s0005 Capsella grandiflora Cagra.0998s0005 I 0.679
Carubv10003283m.g Capsella rubella Carubv10003283m.g I 0.679
Bra035097 Brassica rapa Bra035097 I 0.679
cassava21326.m1 Manihot esculenta cassava21326.m1 I 0.679
Thhalv10018933m.g Eutrema salsugineum Thhalv10018933m.g I 0.678
PK08038.1 Cannabis sativa PK08038.1 I 0.678
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.677
Cla019747 Citrullus lanatus Cla019747 I 0.677
ATMYB13 Arabidopsis thaliana AT1G06180 D 0.676
F775_12010 Aegilops tauschii F775_12010 I 0.675
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.674
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.674
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.674
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I 0.674
Bra018267 Brassica rapa Bra018267 I 0.674
Bra021708 Brassica rapa Bra021708 I 0.674
MYB14 Arabidopsis thaliana AT2G31180 I 0.674
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.674
Bo4g176030 Brassica oleracea Bo4g176030 I 0.674
Bo4g176020 Brassica oleracea Bo4g176020 I 0.674
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.673
Bo3g025100 Brassica oleracea Bo3g025100 I 0.672
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.672
MDP0000215675 Malus domestica MDP0000215675 I 0.672
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I 0.672
MTR_1g076150 Medicago truncatula MTR_1g076150 I 0.672
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.672
LPERR08G15530 Leersia perrieri LPERR08G15530 I 0.671
VIT_18s0117g00200 Vitis vinifera VIT_18s0117g00200 I 0.671
F775_30010 Aegilops tauschii F775_30010 I 0.671
Cla006077 Citrullus lanatus Cla006077 I 0.670
Bra032028 Brassica rapa Bra032028 I 0.670
F775_32664 Aegilops tauschii F775_32664 I 0.670
Cagra.1194s0007 Capsella grandiflora Cagra.1194s0007 I 0.670
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.670
Bo1g155040 Brassica oleracea Bo1g155040 I 0.670
Traes_2DL_7183519F8 Triticum aestivum Traes_2DL_7183519F8 I 0.670
PGSC0003DMG400020071 Solanum tuberosum PGSC0003DMG400020071 I 0.670
Solyc06g083900.2 Solanum lycopersicum Solyc06g083900.2 I 0.670
Bra021382 Brassica rapa Bra021382 I 0.670
MYB107 Arabidopsis thaliana AT3G02940 D 0.670
Bostr.19046s0006 Boechera stricta Bostr.19046s0006 I 0.670
Thhalv10022405m.g Eutrema salsugineum Thhalv10022405m.g I 0.670
MYB107 Arabidopsis lyrata fgenesh2_kg.3__241__AT3G02940.1 I 0.670
Carubv10016434m.g Capsella rubella Carubv10016434m.g I 0.670
Pm009364 Prunus mume Pm009364 I 0.669
Cla021845 Citrullus lanatus Cla021845 I 0.668
chr5.CM0148.360.nc Lotus japonicus chr5.CM0148.360.nc I 0.668
chr5.CM0071.410.nd Lotus japonicus chr5.CM0071.410.nd I 0.667
SapurV1A.1746s0010 Salix purpurea SapurV1A.1746s0010 I 0.667
SapurV1A.0483s0100 Salix purpurea SapurV1A.0483s0100 I 0.667
F775_20725 Aegilops tauschii F775_20725 I 0.667
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.667
BRADI3G28830 Brachypodium distachyon BRADI3G28830 I 0.667
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.667
Gorai.013G088200 Gossypium raimondii Gorai.013G088200 I 0.666
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.666
Lus10039213.g Linum usitatissimum Lus10039213.g I 0.666
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.666
Lus10027458.g Linum usitatissimum Lus10027458.g I 0.665
Bo5g150350 Brassica oleracea Bo5g150350 I 0.665
MTR_1g043080 Medicago truncatula MTR_1g043080 I 0.664
ONIVA04G17140 Oryza nivara ONIVA04G17140 I 0.664
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.663
GLYMA19G34740 Glycine max GLYMA19G34740 I 0.662
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.662
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.661
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I 0.661
MDP0000204699 Malus domestica MDP0000204699 I 0.661
TCM_004046 Theobroma cacao TCM_004046 I 0.661
Bra022831 Brassica rapa Bra022831 I 0.661
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.661
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I 0.661