cassava21326.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava21326.m1 T284070_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.682 0.713
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.682 0.713
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.682 0.713
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava21326.m1 Myb 15 62
cassava21326.m1 Myb 68 136

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.008G277900 Gossypium raimondii Gorai.008G277900 I 0.817
cassava26284.m1 Manihot esculenta cassava26284.m1 I 0.798
Eucgr.K00250 Eucalyptus grandis Eucgr.K00250 I 0.781
TCM_015157 Theobroma cacao TCM_015157 I 0.780
POPTR_0015s13190 Populus trichocarpa POPTR_0015s13190 I 0.778
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I 0.776
PRUPE_ppa019729mg Prunus persica PRUPE_ppa019729mg I 0.769
Pm019344 Prunus mume Pm019344 I 0.769
chr5.CM0148.380.nc Lotus japonicus chr5.CM0148.380.nc I 0.766
MTR_1g100667 Medicago truncatula MTR_1g100667 I 0.760
orange1.1g045400m.g Citrus sinensis orange1.1g045400m.g I 0.758
MDP0000152575 Malus domestica MDP0000152575 I 0.756
gene13281-v1.0-hybrid Fragaria vesca gene13281-v1.0-hybrid I 0.752
Lus10039213.g Linum usitatissimum Lus10039213.g I 0.749
PGSC0003DMG400014291 Solanum tuberosum PGSC0003DMG400014291 I 0.748
Cla001724 Citrullus lanatus Cla001724 I 0.746
SapurV1A.0754s0180 Salix purpurea SapurV1A.0754s0180 I 0.742
PK18276.1 Cannabis sativa PK18276.1 I 0.741
MDP0000896053 Malus domestica MDP0000896053 I 0.741
evm.TU.supercontig_107.47 Carica papaya evm.TU.supercontig_107.47 I 0.740
Lus10027458.g Linum usitatissimum Lus10027458.g I 0.740
mgf024114m Mimulus guttatus mgf024114m I 0.738
Ciclev10006897m.g Citrus clementina Ciclev10006897m.g N 0.736
GLYMA20G29710 Glycine max GLYMA20G29710 I 0.734
GLYMA10G38110 Glycine max GLYMA10G38110 I 0.734
SapurV1A.1253s0100 Salix purpurea SapurV1A.1253s0100 I 0.734
Ca_19758 Cicer arietinum Ca_19758 I 0.732
Eucgr.A02796 Eucalyptus grandis Eucgr.A02796 I 0.730
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I 0.729
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.727
Gorai.008G133700 Gossypium raimondii Gorai.008G133700 I 0.724
VIT_16s0050g00050 Vitis vinifera VIT_16s0050g00050 I 0.720
GSMUA_Achr8G11340_001 Musa acuminata GSMUA_Achr8G11340_001 I 0.719
GLYMA09G25655 Glycine max GLYMA09G25655 I 0.717
Cucsa.107730 Cucumis sativus Cucsa.107730 N 0.716
Solyc03g025870.2 Solanum lycopersicum Solyc03g025870.2 I 0.715
Bostr.18473s0062 Boechera stricta Bostr.18473s0062 I 0.712
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.712
GRMZM2G496770 Zea mays GRMZM2G496770 I 0.706
Sb04g033680 Sorghum bicolor Sb04g033680 I 0.706
Lus10005739.g Linum usitatissimum Lus10005739.g I 0.705
Cucsa.313950 Cucumis sativus Cucsa.313950 I 0.705
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.704
Bra018027 Brassica rapa Bra018027 I 0.704
Cagra.2337s0007 Capsella grandiflora Cagra.2337s0007 I 0.704
Carubv10018592m.g Capsella rubella Carubv10018592m.g I 0.704
Bra029129 Brassica rapa Bra029129 I 0.703
Bo3g023270 Brassica oleracea Bo3g023270 I 0.703
Bostr.7305s0041 Boechera stricta Bostr.7305s0041 I 0.703
AtMYB19 Arabidopsis lyrata fgenesh2_kg.8__1111__AT5G52260.1 I 0.703
ORUFI02G26980 Oryza rufipogon ORUFI02G26980 I 0.701
ORUFI02G22940 Oryza rufipogon ORUFI02G22940 I 0.700
ORGLA03G0178400 Oryza glaberrima ORGLA03G0178400 I 0.700
ONIVA04G28760 Oryza nivara ONIVA04G28760 I 0.700
OS03G0371800 Oryza sativa OS03G0371800 I 0.700
OB02G29290 Oryza brachyantha OB02G29290 I 0.700
ONIVA02G24090 Oryza nivara ONIVA02G24090 I 0.700
OMERI02G21400 Oryza meridionalis OMERI02G21400 I 0.700
OGLUM02G22040 Oryza glumaepatula OGLUM02G22040 I 0.700
OBART02G21860 Oryza barthii OBART02G21860 I 0.700
OGLUM03G19500 Oryza glumaepatula OGLUM03G19500 I 0.700
LPERR03G16350 Leersia perrieri LPERR03G16350 I 0.700
BGIOSGA008493 Oryza indica BGIOSGA008493 I 0.700
Thhalv10010657m.g Eutrema salsugineum Thhalv10010657m.g I 0.697
AMTR_s00036p00107460 Amborella trichopoda AMTR_s00036p00107460 I 0.697
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.696
ONIVA04G13130 Oryza nivara ONIVA04G13130 I 0.695
MDP0000204699 Malus domestica MDP0000204699 I 0.695
Traes_2DL_C964675DE Triticum aestivum Traes_2DL_C964675DE I 0.695
TRIUR3_25784 Triticum urartu TRIUR3_25784 I 0.695
Solyc10g044680.1 Solanum lycopersicum Solyc10g044680.1 I 0.695
OS04G0461000 Oryza sativa OS04G0461000 I 0.695
ORUFI04G16390 Oryza rufipogon ORUFI04G16390 I 0.695
ORGLA04G0119800 Oryza glaberrima ORGLA04G0119800 I 0.695
Si010352m.g Setaria italica Si010352m.g I 0.695
OB04G22310 Oryza brachyantha OB04G22310 I 0.695
GRMZM2G032655 Zea mays GRMZM2G032655 I 0.695
F775_26161 Aegilops tauschii F775_26161 I 0.695
BRADI5G12417 Brachypodium distachyon BRADI5G12417 I 0.695
OBART04G14990 Oryza barthii OBART04G14990 I 0.695
BGIOSGA016547 Oryza indica BGIOSGA016547 I 0.695
Thhalv10014388m.g Eutrema salsugineum Thhalv10014388m.g I 0.694
mgf024107m Mimulus guttatus mgf024107m I 0.693
VIT_07s0005g02480 Vitis vinifera VIT_07s0005g02480 I 0.693
Pm015547 Prunus mume Pm015547 I 0.693
Pm030488 Prunus mume Pm030488 I 0.693
OB04G26810 Oryza brachyantha OB04G26810 I 0.692
Traes_6AL_D10CBA40D Triticum aestivum Traes_6AL_D10CBA40D I 0.692
BGIOSGA008698 Oryza indica BGIOSGA008698 I 0.692
F775_12010 Aegilops tauschii F775_12010 I 0.692
F775_08647 Aegilops tauschii F775_08647 I 0.692
OBART02G25570 Oryza barthii OBART02G25570 I 0.692
Si017947m.g Setaria italica Si017947m.g I 0.692
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.692
Traes_6BL_CE61B9510 Triticum aestivum Traes_6BL_CE61B9510 I 0.692
Traes_6DL_A014E9069 Triticum aestivum Traes_6DL_A014E9069 I 0.692
TRIUR3_32691 Triticum urartu TRIUR3_32691 I 0.692
ONIVA02G28010 Oryza nivara ONIVA02G28010 I 0.692
OPUNC02G23410 Oryza punctata OPUNC02G23410 I 0.692
OMERI02G25080 Oryza meridionalis OMERI02G25080 I 0.692
GRMZM2G170049 Zea mays GRMZM2G170049 I 0.692
OGLUM02G26100 Oryza glumaepatula OGLUM02G26100 I 0.692
OB02G32950 Oryza brachyantha OB02G32950 I 0.692
Traes_2AL_962A9D448 Triticum aestivum Traes_2AL_962A9D448 I 0.688
Traes_2BL_604FE7639 Triticum aestivum Traes_2BL_604FE7639 I 0.688
Traes_2BL_03F3475CD Triticum aestivum Traes_2BL_03F3475CD I 0.688
Eucgr.K00251 Eucalyptus grandis Eucgr.K00251 N 0.688
BRADI5G16672 Brachypodium distachyon BRADI5G16672 I 0.688
AtMYB19 Arabidopsis thaliana AT5G52260 I 0.688
BRADI3G49970 Brachypodium distachyon BRADI3G49970 I 0.687
Cla006288 Citrullus lanatus Cla006288 I 0.687
Pm028882 Prunus mume Pm028882 I 0.687
PDK_20s1606731g001 Phoenix dactylifera PDK_20s1606731g001 I 0.686
PGSC0003DMG400015767 Solanum tuberosum PGSC0003DMG400015767 I 0.684
LPERR04G16000 Leersia perrieri LPERR04G16000 I 0.683
GRMZM2G147698 Zea mays GRMZM2G147698 I 0.683
Pavir.J03230 Panicum virgatum Pavir.J03230 I 0.683
LPERR08G15530 Leersia perrieri LPERR08G15530 I 0.683
Pavir.Ab02417 Panicum virgatum Pavir.Ab02417 I 0.683
Si036638m.g Setaria italica Si036638m.g I 0.683
Sb06g023610 Sorghum bicolor Sb06g023610 I 0.683
gw1.149.61.1 Physcomitrella patens gw1.149.61.1 I 0.682
GLYMA19G41250 Glycine max GLYMA19G41250 I 0.682
MTR_1g085040 Medicago truncatula MTR_1g085040 I 0.682
MYB55 Arabidopsis thaliana AT4G01680 D 0.682
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.682
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.682
GLYMA03G38660 Glycine max GLYMA03G38660 I 0.682
Ca_03589 Cicer arietinum Ca_03589 I 0.682
Cagra.0334s0011 Capsella grandiflora Cagra.0334s0011 I 0.682
Ca_01072 Cicer arietinum Ca_01072 I 0.682
GLYMA20G22230 Glycine max GLYMA20G22230 I 0.682
Bostr.4825s0008 Boechera stricta Bostr.4825s0008 I 0.682
MYB55 Arabidopsis lyrata fgenesh2_kg.6__3543__AT4G01680.1 I 0.682
Bra036317 Brassica rapa Bra036317 I 0.682
Bo8g077360 Brassica oleracea Bo8g077360 I 0.682
Bo9g004210 Brassica oleracea Bo9g004210 I 0.682
Carubv10001308m.g Capsella rubella Carubv10001308m.g I 0.682
Pavir.Ab02021 Panicum virgatum Pavir.Ab02021 I 0.679
Si017851m.g Setaria italica Si017851m.g I 0.679
Sb04g024000 Sorghum bicolor Sb04g024000 I 0.679
LPERR04G19390 Leersia perrieri LPERR04G19390 I 0.679
GSMUA_Achr6G02550_001 Musa acuminata GSMUA_Achr6G02550_001 I 0.677
GSMUA_Achr7G18410_001 Musa acuminata GSMUA_Achr7G18410_001 I 0.677
SELMODRAFT_437219 Selaginella moellendorffii SELMODRAFT_437219 I 0.677
Bostr.30057s0004 Boechera stricta Bostr.30057s0004 I 0.676
GLYMA03G38410 Glycine max GLYMA03G38410 I 0.676
Gorai.007G118200 Gossypium raimondii Gorai.007G118200 I 0.676
chr5.CM0048.320.nd Lotus japonicus chr5.CM0048.320.nd I 0.676
Ciclev10020144m.g Citrus clementina Ciclev10020144m.g I 0.676
SapurV1A.3474s0020 Salix purpurea SapurV1A.3474s0020 I 0.676
orange1.1g013300m.g Citrus sinensis orange1.1g013300m.g I 0.676
Gorai.001G148500 Gossypium raimondii Gorai.001G148500 I 0.676
Gorai.004G147600 Gossypium raimondii Gorai.004G147600 I 0.676
SapurV1A.0321s0070 Salix purpurea SapurV1A.0321s0070 I 0.676
GLYMA10G27940 Glycine max GLYMA10G27940 I 0.676
GLYMA02G00960 Glycine max GLYMA02G00960 I 0.676
GLYMA19G41010 Glycine max GLYMA19G41010 I 0.676
TCM_004965 Theobroma cacao TCM_004965 I 0.676
Ca_03564 Cicer arietinum Ca_03564 I 0.676
MTR_7g110830 Medicago truncatula MTR_7g110830 I 0.676
POPTR_0014s10680 Populus trichocarpa POPTR_0014s10680 I 0.676
POPTR_0002s18700 Populus trichocarpa POPTR_0002s18700 I 0.676
cassava33008.m1 Manihot esculenta cassava33008.m1 I 0.676
MTR_1g085640 Medicago truncatula MTR_1g085640 I 0.676
GSMUA_Achr11G00430_001 Musa acuminata GSMUA_Achr11G00430_001 I 0.675
GSMUA_Achr2G18440_001 Musa acuminata GSMUA_Achr2G18440_001 I 0.675
GSMUA_Achr5G18400_001 Musa acuminata GSMUA_Achr5G18400_001 I 0.675
GSMUA_Achr11G15910_001 Musa acuminata GSMUA_Achr11G15910_001 I 0.675
Solyc01g102340.2 Solanum lycopersicum Solyc01g102340.2 I 0.673
PGSC0003DMG400018279 Solanum tuberosum PGSC0003DMG400018279 I 0.673
MDP0000653903 Malus domestica MDP0000653903 I 0.672
MDP0000601420 Malus domestica MDP0000601420 I 0.672
AtMYB45 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001377 I 0.672
PRUPE_ppa017235mg Prunus persica PRUPE_ppa017235mg I 0.672
TCM_026853 Theobroma cacao TCM_026853 I 0.672
Thhalv10023601m.g Eutrema salsugineum Thhalv10023601m.g I 0.672
Cucsa.051050 Cucumis sativus Cucsa.051050 I 0.672
cassava17679.valid.m1 Manihot esculenta cassava17679.valid.m1 I 0.672
PRUPE_ppa020394mg Prunus persica PRUPE_ppa020394mg I 0.672
gene22961-v1.0-hybrid Fragaria vesca gene22961-v1.0-hybrid I 0.672
MDP0000932804 Malus domestica MDP0000932804 I 0.672
PRUPE_ppa019718mg Prunus persica PRUPE_ppa019718mg I 0.672
AtMYB50 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003728 I 0.672
Pm003267 Prunus mume Pm003267 I 0.672
Cla005219 Citrullus lanatus Cla005219 I 0.672
PK03176.1 Cannabis sativa PK03176.1 I 0.672
AtMYB50 Arabidopsis thaliana AT1G57560 I 0.672
fgenesh1_pg.scaffold_189000016 Physcomitrella patens fgenesh1_pg.scaffold_189000016 I 0.672
cassava12868.valid.m1 Manihot esculenta cassava12868.valid.m1 I 0.672
e_gw1.24.66.1 Physcomitrella patens e_gw1.24.66.1 I 0.672
ORGLA04G0168700 Oryza glaberrima ORGLA04G0168700 I 0.671
ORGLA10G0151700 Oryza glaberrima ORGLA10G0151700 I 0.671
OS04G0532800 Oryza sativa OS04G0532800 I 0.671
OGLUM04G19590 Oryza glumaepatula OGLUM04G19590 I 0.671
ONIVA04G17950 Oryza nivara ONIVA04G17950 I 0.671
BGIOSGA016820 Oryza indica BGIOSGA016820 I 0.671
ORUFI04G21270 Oryza rufipogon ORUFI04G21270 I 0.671
OPUNC04G17450 Oryza punctata OPUNC04G17450 I 0.671
OMERI04G16730 Oryza meridionalis OMERI04G16730 I 0.671
OBART04G19730 Oryza barthii OBART04G19730 I 0.671
orange1.1g021164m.g Citrus sinensis orange1.1g021164m.g I 0.670
Ciclev10017658m.g Citrus clementina Ciclev10017658m.g I 0.670
Cucsa.107740 Cucumis sativus Cucsa.107740 I 0.668
AtMYB45 Arabidopsis thaliana AT3G48920 I 0.668
GSMUA_Achr3G12200_001 Musa acuminata GSMUA_Achr3G12200_001 I 0.668
TRIUR3_15020 Triticum urartu TRIUR3_15020 I 0.667
MLOC_73614 Hordeum vulgare MLOC_73614 I 0.667
Traes_2BL_7CEC6A8D7 Triticum aestivum Traes_2BL_7CEC6A8D7 I 0.667
Eucgr.K00555 Eucalyptus grandis Eucgr.K00555 I 0.667
Traes_2BL_35241DE8D Triticum aestivum Traes_2BL_35241DE8D I 0.667
Traes_2AL_2D4100475 Triticum aestivum Traes_2AL_2D4100475 I 0.667
GSMUA_Achr3G24580_001 Musa acuminata GSMUA_Achr3G24580_001 I 0.666
Cagra.0094s0035 Capsella grandiflora Cagra.0094s0035 I 0.666
Aquca_003_00245 Aquilegia coerulea Aquca_003_00245 I 0.666
GSMUA_Achr2G07930_001 Musa acuminata GSMUA_Achr2G07930_001 I 0.666
AMTR_s00045p00146180 Amborella trichopoda AMTR_s00045p00146180 I 0.666
mgf003709m Mimulus guttatus mgf003709m I 0.666
Eucgr.B02197 Eucalyptus grandis Eucgr.B02197 I 0.666
Carubv10027541m.g Capsella rubella Carubv10027541m.g I 0.666
Pavir.Aa01234 Panicum virgatum Pavir.Aa01234 N 0.665
LAF1 Arabidopsis thaliana AT4G25560 I 0.664
Carubv10007732m.g Capsella rubella Carubv10007732m.g I 0.664
Bostr.7867s0367 Boechera stricta Bostr.7867s0367 I 0.664
Cagra.23907s0010 Capsella grandiflora Cagra.23907s0010 I 0.664
Lus10005740.g Linum usitatissimum Lus10005740.g I 0.663
GSMUA_Achr2G11450_001 Musa acuminata GSMUA_Achr2G11450_001 N 0.662
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.662
Si012304m.g Setaria italica Si012304m.g I 0.662
Pavir.Ga00879 Panicum virgatum Pavir.Ga00879 I 0.662
Pavir.Gb00734 Panicum virgatum Pavir.Gb00734 I 0.662
GLYMA02G12266 Glycine max GLYMA02G12266 I 0.661
SapurV1A.0264s0440 Salix purpurea SapurV1A.0264s0440 I 0.661