Pavir.Aa01234 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Aa01234 T288971_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa01234.1.p Myb 15 62
Pavir.Aa01234.1.p Myb 68 113

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si017947m.g Setaria italica Si017947m.g I 0.847
Pavir.Ab02417 Panicum virgatum Pavir.Ab02417 I 0.838
OB04G26810 Oryza brachyantha OB04G26810 I 0.838
LPERR04G16000 Leersia perrieri LPERR04G16000 I 0.829
BRADI5G16672 Brachypodium distachyon BRADI5G16672 I 0.826
Traes_2BL_604FE7639 Triticum aestivum Traes_2BL_604FE7639 I 0.826
Traes_2AL_962A9D448 Triticum aestivum Traes_2AL_962A9D448 I 0.826
Traes_2BL_03F3475CD Triticum aestivum Traes_2BL_03F3475CD I 0.822
ORGLA10G0151700 Oryza glaberrima ORGLA10G0151700 I 0.816
OMERI04G16730 Oryza meridionalis OMERI04G16730 I 0.816
ORUFI04G21270 Oryza rufipogon ORUFI04G21270 I 0.816
OBART04G19730 Oryza barthii OBART04G19730 I 0.816
ONIVA04G17950 Oryza nivara ONIVA04G17950 I 0.816
OGLUM04G19590 Oryza glumaepatula OGLUM04G19590 I 0.816
OPUNC04G17450 Oryza punctata OPUNC04G17450 I 0.816
BGIOSGA016820 Oryza indica BGIOSGA016820 I 0.816
ORGLA04G0168700 Oryza glaberrima ORGLA04G0168700 I 0.816
OS04G0532800 Oryza sativa OS04G0532800 I 0.816
TRIUR3_32691 Triticum urartu TRIUR3_32691 I 0.812
Traes_6DL_A014E9069 Triticum aestivum Traes_6DL_A014E9069 I 0.812
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.812
GRMZM2G170049 Zea mays GRMZM2G170049 I 0.812
Traes_6BL_CE61B9510 Triticum aestivum Traes_6BL_CE61B9510 I 0.812
Traes_6AL_D10CBA40D Triticum aestivum Traes_6AL_D10CBA40D I 0.812
F775_08647 Aegilops tauschii F775_08647 I 0.812
BRADI3G49970 Brachypodium distachyon BRADI3G49970 I 0.807
Traes_2BL_7CEC6A8D7 Triticum aestivum Traes_2BL_7CEC6A8D7 I 0.805
Traes_2BL_35241DE8D Triticum aestivum Traes_2BL_35241DE8D I 0.805
Traes_2AL_2D4100475 Triticum aestivum Traes_2AL_2D4100475 I 0.805
TRIUR3_15020 Triticum urartu TRIUR3_15020 I 0.801
Sb04g033680 Sorghum bicolor Sb04g033680 I 0.800
OBART02G25570 Oryza barthii OBART02G25570 I 0.796
BGIOSGA008698 Oryza indica BGIOSGA008698 I 0.796
OB02G32950 Oryza brachyantha OB02G32950 I 0.796
OPUNC02G23410 Oryza punctata OPUNC02G23410 I 0.796
ONIVA02G28010 Oryza nivara ONIVA02G28010 I 0.796
OMERI02G25080 Oryza meridionalis OMERI02G25080 I 0.796
OGLUM02G26100 Oryza glumaepatula OGLUM02G26100 I 0.792
GRMZM2G496770 Zea mays GRMZM2G496770 I 0.790
ORUFI02G26980 Oryza rufipogon ORUFI02G26980 I 0.787
Traes_2AL_AF9357B4C Triticum aestivum Traes_2AL_AF9357B4C N 0.785
Sb06g023610 Sorghum bicolor Sb06g023610 I 0.783
Si012304m.g Setaria italica Si012304m.g I 0.781
Pavir.Gb00734 Panicum virgatum Pavir.Gb00734 I 0.781
Pavir.Ga00879 Panicum virgatum Pavir.Ga00879 I 0.781
MLOC_73614 Hordeum vulgare MLOC_73614 I 0.775
GSMUA_Achr8G11340_001 Musa acuminata GSMUA_Achr8G11340_001 I 0.738
AMTR_s00036p00107460 Amborella trichopoda AMTR_s00036p00107460 I 0.733
F775_52175 Aegilops tauschii F775_52175 N 0.730
TRIUR3_27902 Triticum urartu TRIUR3_27902 N 0.727
MTR_1g100667 Medicago truncatula MTR_1g100667 I 0.710
mgf024114m Mimulus guttatus mgf024114m I 0.707
TRIUR3_15022 Triticum urartu TRIUR3_15022 N 0.705
TCM_015157 Theobroma cacao TCM_015157 I 0.705
PDK_20s1606731g001 Phoenix dactylifera PDK_20s1606731g001 I 0.702
chr5.CM0148.380.nc Lotus japonicus chr5.CM0148.380.nc I 0.701
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.697
Cucsa.313950 Cucumis sativus Cucsa.313950 I 0.694
GLYMA09G25655 Glycine max GLYMA09G25655 I 0.693
PRUPE_ppa019729mg Prunus persica PRUPE_ppa019729mg I 0.685
Pm019344 Prunus mume Pm019344 I 0.685
Ca_19758 Cicer arietinum Ca_19758 I 0.684
GLYMA20G29710 Glycine max GLYMA20G29710 I 0.683
GLYMA10G38110 Glycine max GLYMA10G38110 I 0.683
Eucgr.K00250 Eucalyptus grandis Eucgr.K00250 I 0.683
Cla001724 Citrullus lanatus Cla001724 I 0.683
gene13281-v1.0-hybrid Fragaria vesca gene13281-v1.0-hybrid I 0.683
Bo7g095130 Brassica oleracea Bo7g095130 I 0.682
MYB86 Arabidopsis thaliana AT5G26660 I 0.682
Bra036588 Brassica rapa Bra036588 I 0.682
Bo9g010860 Brassica oleracea Bo9g010860 I 0.682
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.682
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.682
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.682
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.682
Bo2g156300 Brassica oleracea Bo2g156300 I 0.682
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.682
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.682
SapurV1A.0754s0180 Salix purpurea SapurV1A.0754s0180 I 0.681
Gorai.008G277900 Gossypium raimondii Gorai.008G277900 I 0.681
PGSC0003DMG400014291 Solanum tuberosum PGSC0003DMG400014291 I 0.679
TRIUR3_25784 Triticum urartu TRIUR3_25784 I 0.675
Si010352m.g Setaria italica Si010352m.g I 0.675
GRMZM2G032655 Zea mays GRMZM2G032655 I 0.675
Aquca_011_00538 Aquilegia coerulea Aquca_011_00538 I 0.675
Traes_2DL_C964675DE Triticum aestivum Traes_2DL_C964675DE I 0.675
F775_26161 Aegilops tauschii F775_26161 I 0.675
BRADI5G12417 Brachypodium distachyon BRADI5G12417 I 0.675
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.675
POPTR_0015s13190 Populus trichocarpa POPTR_0015s13190 I 0.673
cassava26284.m1 Manihot esculenta cassava26284.m1 I 0.671
MDP0000152575 Malus domestica MDP0000152575 I 0.671
ORUFI02G22940 Oryza rufipogon ORUFI02G22940 I 0.671
OGLUM02G22040 Oryza glumaepatula OGLUM02G22040 I 0.671
BGIOSGA016547 Oryza indica BGIOSGA016547 I 0.671
OBART04G14990 Oryza barthii OBART04G14990 I 0.671
OBART02G21860 Oryza barthii OBART02G21860 I 0.671
OB04G22310 Oryza brachyantha OB04G22310 I 0.671
OMERI02G21400 Oryza meridionalis OMERI02G21400 I 0.671
ONIVA02G24090 Oryza nivara ONIVA02G24090 I 0.671
OS04G0461000 Oryza sativa OS04G0461000 I 0.671
BGIOSGA008493 Oryza indica BGIOSGA008493 I 0.671
OB02G29290 Oryza brachyantha OB02G29290 I 0.671
ORUFI04G16390 Oryza rufipogon ORUFI04G16390 I 0.671
ORGLA04G0119800 Oryza glaberrima ORGLA04G0119800 I 0.671
ONIVA04G13130 Oryza nivara ONIVA04G13130 I 0.671
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I 0.668
evm.TU.supercontig_107.47 Carica papaya evm.TU.supercontig_107.47 I 0.665
cassava21326.m1 Manihot esculenta cassava21326.m1 I 0.665
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I 0.664
Bra020526 Brassica rapa Bra020526 I 0.663
Lus10005740.g Linum usitatissimum Lus10005740.g I 0.662
AtMYB19 Arabidopsis thaliana AT5G52260 I 0.662
Bostr.7305s0041 Boechera stricta Bostr.7305s0041 I 0.662
Bo3g023270 Brassica oleracea Bo3g023270 I 0.662
Bra029129 Brassica rapa Bra029129 I 0.662
AtMYB19 Arabidopsis lyrata fgenesh2_kg.8__1111__AT5G52260.1 I 0.662
SapurV1A.1077s0040 Salix purpurea SapurV1A.1077s0040 I 0.661
GSMUA_Achr2G01830_001 Musa acuminata GSMUA_Achr2G01830_001 I 0.661