Lus10005740.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10005740.g T287891_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.661 0.688
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.661 0.688
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.661 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10005740 Myb 13 60
Lus10005740 Myb 66 111

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10005739.g Linum usitatissimum Lus10005739.g I 0.809
Lus10039213.g Linum usitatissimum Lus10039213.g I 0.793
Lus10027458.g Linum usitatissimum Lus10027458.g I 0.784
PGSC0003DMG400014291 Solanum tuberosum PGSC0003DMG400014291 I 0.768
POPTR_0015s13190 Populus trichocarpa POPTR_0015s13190 I 0.759
AMTR_s00036p00107460 Amborella trichopoda AMTR_s00036p00107460 I 0.756
cassava26284.m1 Manihot esculenta cassava26284.m1 I 0.756
Pm019344 Prunus mume Pm019344 I 0.755
PRUPE_ppa019729mg Prunus persica PRUPE_ppa019729mg I 0.755
gene13281-v1.0-hybrid Fragaria vesca gene13281-v1.0-hybrid I 0.753
MDP0000152575 Malus domestica MDP0000152575 I 0.750
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I 0.738
evm.TU.supercontig_107.47 Carica papaya evm.TU.supercontig_107.47 I 0.737
SapurV1A.0754s0180 Salix purpurea SapurV1A.0754s0180 I 0.736
MDP0000896053 Malus domestica MDP0000896053 I 0.735
Solyc03g025870.2 Solanum lycopersicum Solyc03g025870.2 I 0.733
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.731
AtMYB18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001401 I 0.731
orange1.1g045400m.g Citrus sinensis orange1.1g045400m.g I 0.730
Gorai.008G277900 Gossypium raimondii Gorai.008G277900 I 0.729
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I 0.728
mgf024114m Mimulus guttatus mgf024114m I 0.728
chr5.CM0148.380.nc Lotus japonicus chr5.CM0148.380.nc I 0.727
Cucsa.313950 Cucumis sativus Cucsa.313950 I 0.724
MTR_1g100667 Medicago truncatula MTR_1g100667 I 0.722
Thhalv10014388m.g Eutrema salsugineum Thhalv10014388m.g I 0.722
ORUFI02G26980 Oryza rufipogon ORUFI02G26980 I 0.721
TCM_015157 Theobroma cacao TCM_015157 I 0.720
Ca_19758 Cicer arietinum Ca_19758 I 0.720
SapurV1A.1253s0100 Salix purpurea SapurV1A.1253s0100 I 0.717
PK18276.1 Cannabis sativa PK18276.1 I 0.714
Bo3g023270 Brassica oleracea Bo3g023270 I 0.713
Bostr.7305s0041 Boechera stricta Bostr.7305s0041 I 0.713
Cla001724 Citrullus lanatus Cla001724 I 0.713
Bra029129 Brassica rapa Bra029129 I 0.713
OMERI02G25080 Oryza meridionalis OMERI02G25080 I 0.712
OGLUM02G26100 Oryza glumaepatula OGLUM02G26100 I 0.712
Traes_6BL_CE61B9510 Triticum aestivum Traes_6BL_CE61B9510 I 0.712
OBART02G25570 Oryza barthii OBART02G25570 I 0.712
ONIVA02G28010 Oryza nivara ONIVA02G28010 I 0.712
OPUNC02G23410 Oryza punctata OPUNC02G23410 I 0.712
TRIUR3_32691 Triticum urartu TRIUR3_32691 I 0.712
OB02G32950 Oryza brachyantha OB02G32950 I 0.712
Traes_6AL_D10CBA40D Triticum aestivum Traes_6AL_D10CBA40D I 0.712
Traes_6DL_A014E9069 Triticum aestivum Traes_6DL_A014E9069 I 0.712
Sb06g023610 Sorghum bicolor Sb06g023610 I 0.712
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.712
LPERR04G16000 Leersia perrieri LPERR04G16000 I 0.712
F775_08647 Aegilops tauschii F775_08647 I 0.712
BGIOSGA008698 Oryza indica BGIOSGA008698 I 0.712
Ciclev10006897m.g Citrus clementina Ciclev10006897m.g N 0.709
Si017947m.g Setaria italica Si017947m.g I 0.707
OB04G26810 Oryza brachyantha OB04G26810 I 0.707
Pavir.Ab02417 Panicum virgatum Pavir.Ab02417 I 0.707
BRADI3G49970 Brachypodium distachyon BRADI3G49970 I 0.707
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.706
Traes_2AL_962A9D448 Triticum aestivum Traes_2AL_962A9D448 I 0.701
Traes_2BL_604FE7639 Triticum aestivum Traes_2BL_604FE7639 I 0.701
Eucgr.A02796 Eucalyptus grandis Eucgr.A02796 I 0.701
BRADI5G16672 Brachypodium distachyon BRADI5G16672 I 0.701
Traes_2BL_03F3475CD Triticum aestivum Traes_2BL_03F3475CD I 0.701
GSMUA_Achr8G11340_001 Musa acuminata GSMUA_Achr8G11340_001 I 0.697
AtMYB19 Arabidopsis thaliana AT5G52260 I 0.696
GLYMA09G25655 Glycine max GLYMA09G25655 I 0.696
AtMYB19 Arabidopsis lyrata fgenesh2_kg.8__1111__AT5G52260.1 I 0.696
GLYMA10G38110 Glycine max GLYMA10G38110 I 0.695
GLYMA20G29710 Glycine max GLYMA20G29710 I 0.695
VIT_16s0050g00050 Vitis vinifera VIT_16s0050g00050 I 0.693
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.692
Cagra.23907s0010 Capsella grandiflora Cagra.23907s0010 I 0.692
Bostr.7867s0367 Boechera stricta Bostr.7867s0367 I 0.692
LAF1 Arabidopsis thaliana AT4G25560 I 0.692
Carubv10007732m.g Capsella rubella Carubv10007732m.g I 0.692
OBART04G19730 Oryza barthii OBART04G19730 I 0.691
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.691
OGLUM04G19590 Oryza glumaepatula OGLUM04G19590 I 0.691
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.691
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.691
MYB86 Arabidopsis thaliana AT5G26660 I 0.691
Bo2g156300 Brassica oleracea Bo2g156300 I 0.691
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.691
BGIOSGA016820 Oryza indica BGIOSGA016820 I 0.691
Bo7g095130 Brassica oleracea Bo7g095130 I 0.691
Pavir.Gb00734 Panicum virgatum Pavir.Gb00734 I 0.691
OMERI04G16730 Oryza meridionalis OMERI04G16730 I 0.691
Bo9g010860 Brassica oleracea Bo9g010860 I 0.691
Pavir.Ga00879 Panicum virgatum Pavir.Ga00879 I 0.691
Bra036588 Brassica rapa Bra036588 I 0.691
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.691
Si012304m.g Setaria italica Si012304m.g I 0.691
ONIVA04G17950 Oryza nivara ONIVA04G17950 I 0.691
OS04G0532800 Oryza sativa OS04G0532800 I 0.691
ORGLA04G0168700 Oryza glaberrima ORGLA04G0168700 I 0.691
ORUFI04G21270 Oryza rufipogon ORUFI04G21270 I 0.691
OPUNC04G17450 Oryza punctata OPUNC04G17450 I 0.691
ORGLA10G0151700 Oryza glaberrima ORGLA10G0151700 I 0.691
Eucgr.K00250 Eucalyptus grandis Eucgr.K00250 I 0.686
GRMZM2G170049 Zea mays GRMZM2G170049 I 0.682
Traes_2AL_2D4100475 Triticum aestivum Traes_2AL_2D4100475 I 0.679
Traes_2BL_35241DE8D Triticum aestivum Traes_2BL_35241DE8D I 0.679
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.679
GSMUA_Achr2G01830_001 Musa acuminata GSMUA_Achr2G01830_001 I 0.679
MLOC_73614 Hordeum vulgare MLOC_73614 I 0.679
TRIUR3_15020 Triticum urartu TRIUR3_15020 I 0.679
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.679
Traes_2BL_7CEC6A8D7 Triticum aestivum Traes_2BL_7CEC6A8D7 I 0.679
OS10G0478300 Oryza sativa OS10G0478300 I 0.679
Cagra.0094s0035 Capsella grandiflora Cagra.0094s0035 I 0.677
Carubv10027541m.g Capsella rubella Carubv10027541m.g I 0.677
Traes_2BS_CA02DC5B2 Triticum aestivum Traes_2BS_CA02DC5B2 I 0.677
Eucgr.K00251 Eucalyptus grandis Eucgr.K00251 N 0.676
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.676
GRMZM2G496770 Zea mays GRMZM2G496770 I 0.676
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.675
Sb04g033680 Sorghum bicolor Sb04g033680 I 0.675
Thhalv10010657m.g Eutrema salsugineum Thhalv10010657m.g I 0.674
VIT_01s0010g00410 Vitis vinifera VIT_01s0010g00410 I 0.673
Bra020526 Brassica rapa Bra020526 I 0.672
SapurV1A.1077s0040 Salix purpurea SapurV1A.1077s0040 I 0.670
Eucgr.K00555 Eucalyptus grandis Eucgr.K00555 I 0.670
chr1.CM0206.990.nd Lotus japonicus chr1.CM0206.990.nd I 0.670
Eucgr.A00996 Eucalyptus grandis Eucgr.A00996 I 0.666
OMERI02G27850 Oryza meridionalis OMERI02G27850 I 0.665
BGIOSGA005798 Oryza indica BGIOSGA005798 I 0.665
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I 0.665
Bra018027 Brassica rapa Bra018027 I 0.665
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I 0.665
OLONG_022853 Oryza longistaminata OLONG_022853 I 0.665
ONIVA02G31530 Oryza nivara ONIVA02G31530 I 0.665
OBART02G28790 Oryza barthii OBART02G28790 I 0.665
OS02G0695200 Oryza sativa OS02G0695200 I 0.665
OB07G21090 Oryza brachyantha OB07G21090 I 0.665
GSMUA_Achr4G29410_001 Musa acuminata GSMUA_Achr4G29410_001 I 0.664
cassava21326.m1 Manihot esculenta cassava21326.m1 I 0.663
Pavir.Aa01234 Panicum virgatum Pavir.Aa01234 N 0.662
gene06920-v1.0-hybrid Fragaria vesca gene06920-v1.0-hybrid I 0.662
VIT_05s0020g01100 Vitis vinifera VIT_05s0020g01100 I 0.662
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.661
Bostr.4825s0008 Boechera stricta Bostr.4825s0008 I 0.661
GLYMA20G22230 Glycine max GLYMA20G22230 I 0.661
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.661
GLYMA19G41250 Glycine max GLYMA19G41250 I 0.661
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.661
Ca_01072 Cicer arietinum Ca_01072 I 0.661
Ca_03589 Cicer arietinum Ca_03589 I 0.661
Carubv10001308m.g Capsella rubella Carubv10001308m.g I 0.661
GLYMA03G38660 Glycine max GLYMA03G38660 I 0.661
MYB55 Arabidopsis lyrata fgenesh2_kg.6__3543__AT4G01680.1 I 0.661
Eucgr.H01337 Eucalyptus grandis Eucgr.H01337 I 0.661
MYB55 Arabidopsis thaliana AT4G01680 D 0.661
Cagra.0334s0011 Capsella grandiflora Cagra.0334s0011 I 0.661
Bra036317 Brassica rapa Bra036317 I 0.661
MTR_1g085040 Medicago truncatula MTR_1g085040 I 0.661
Bo9g004210 Brassica oleracea Bo9g004210 I 0.661