Lus10005739.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10005739.g T287890_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.667 0.688
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.667 0.688
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.667 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10005739 Myb 15 62
Lus10005739 Myb 68 113

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10039213.g Linum usitatissimum Lus10039213.g I 0.847
Lus10027458.g Linum usitatissimum Lus10027458.g I 0.837
orange1.1g045400m.g Citrus sinensis orange1.1g045400m.g I 0.810
Lus10005740.g Linum usitatissimum Lus10005740.g I 0.809
cassava26284.m1 Manihot esculenta cassava26284.m1 I 0.798
Ciclev10006897m.g Citrus clementina Ciclev10006897m.g N 0.789
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I 0.782
POPTR_0015s13190 Populus trichocarpa POPTR_0015s13190 I 0.774
PGSC0003DMG400014291 Solanum tuberosum PGSC0003DMG400014291 I 0.773
Pm019344 Prunus mume Pm019344 I 0.767
PRUPE_ppa019729mg Prunus persica PRUPE_ppa019729mg I 0.767
gene13281-v1.0-hybrid Fragaria vesca gene13281-v1.0-hybrid I 0.767
MDP0000152575 Malus domestica MDP0000152575 I 0.763
Eucgr.A02796 Eucalyptus grandis Eucgr.A02796 I 0.760
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I 0.753
Gorai.008G277900 Gossypium raimondii Gorai.008G277900 I 0.753
mgf024114m Mimulus guttatus mgf024114m I 0.751
SapurV1A.0754s0180 Salix purpurea SapurV1A.0754s0180 I 0.751
chr5.CM0148.380.nc Lotus japonicus chr5.CM0148.380.nc I 0.749
evm.TU.supercontig_107.47 Carica papaya evm.TU.supercontig_107.47 I 0.749
MDP0000896053 Malus domestica MDP0000896053 I 0.748
MTR_1g100667 Medicago truncatula MTR_1g100667 I 0.743
AMTR_s00036p00107460 Amborella trichopoda AMTR_s00036p00107460 I 0.739
Cucsa.313950 Cucumis sativus Cucsa.313950 I 0.738
Thhalv10014388m.g Eutrema salsugineum Thhalv10014388m.g I 0.733
TCM_015157 Theobroma cacao TCM_015157 I 0.732
SapurV1A.1253s0100 Salix purpurea SapurV1A.1253s0100 I 0.731
Ca_19758 Cicer arietinum Ca_19758 I 0.731
Eucgr.K00250 Eucalyptus grandis Eucgr.K00250 I 0.730
Solyc03g025870.2 Solanum lycopersicum Solyc03g025870.2 I 0.729
Cla001724 Citrullus lanatus Cla001724 I 0.728
PK18276.1 Cannabis sativa PK18276.1 I 0.726
OB07G21090 Oryza brachyantha OB07G21090 I 0.725
Bostr.7305s0041 Boechera stricta Bostr.7305s0041 I 0.724
Bra029129 Brassica rapa Bra029129 I 0.724
Bo3g023270 Brassica oleracea Bo3g023270 I 0.724
Eucgr.K00251 Eucalyptus grandis Eucgr.K00251 N 0.720
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.719
AtMYB18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001401 I 0.719
VIT_16s0050g00050 Vitis vinifera VIT_16s0050g00050 I 0.717
OBART04G14990 Oryza barthii OBART04G14990 I 0.715
GRMZM2G032655 Zea mays GRMZM2G032655 I 0.715
ONIVA04G13130 Oryza nivara ONIVA04G13130 I 0.715
ORGLA04G0119800 Oryza glaberrima ORGLA04G0119800 I 0.715
BGIOSGA016547 Oryza indica BGIOSGA016547 I 0.715
ORUFI04G16390 Oryza rufipogon ORUFI04G16390 I 0.715
OS04G0461000 Oryza sativa OS04G0461000 I 0.715
TRIUR3_25784 Triticum urartu TRIUR3_25784 I 0.715
F775_26161 Aegilops tauschii F775_26161 I 0.715
BRADI5G12417 Brachypodium distachyon BRADI5G12417 I 0.715
Traes_2DL_C964675DE Triticum aestivum Traes_2DL_C964675DE I 0.715
OB04G22310 Oryza brachyantha OB04G22310 I 0.715
Si010352m.g Setaria italica Si010352m.g I 0.715
GSMUA_Achr8G11340_001 Musa acuminata GSMUA_Achr8G11340_001 I 0.711
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.711
Bostr.7867s0367 Boechera stricta Bostr.7867s0367 I 0.710
Carubv10007732m.g Capsella rubella Carubv10007732m.g I 0.710
Sb01g034270 Sorghum bicolor Sb01g034270 I 0.710
LAF1 Arabidopsis thaliana AT4G25560 I 0.710
Cagra.23907s0010 Capsella grandiflora Cagra.23907s0010 I 0.710
OB02G29290 Oryza brachyantha OB02G29290 I 0.709
OGLUM02G22040 Oryza glumaepatula OGLUM02G22040 I 0.709
OBART02G21860 Oryza barthii OBART02G21860 I 0.709
OMERI02G21400 Oryza meridionalis OMERI02G21400 I 0.709
BGIOSGA008493 Oryza indica BGIOSGA008493 I 0.709
ONIVA02G24090 Oryza nivara ONIVA02G24090 I 0.709
ORUFI02G22940 Oryza rufipogon ORUFI02G22940 I 0.709
ONIVA02G31530 Oryza nivara ONIVA02G31530 I 0.708
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I 0.708
OMERI02G27850 Oryza meridionalis OMERI02G27850 I 0.708
OLONG_022853 Oryza longistaminata OLONG_022853 I 0.708
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I 0.708
OBART02G28790 Oryza barthii OBART02G28790 I 0.708
OS02G0695200 Oryza sativa OS02G0695200 I 0.708
GLYMA10G38110 Glycine max GLYMA10G38110 I 0.708
GLYMA09G25655 Glycine max GLYMA09G25655 I 0.708
GLYMA20G29710 Glycine max GLYMA20G29710 I 0.708
BGIOSGA005798 Oryza indica BGIOSGA005798 I 0.708
AtMYB19 Arabidopsis lyrata fgenesh2_kg.8__1111__AT5G52260.1 I 0.707
Traes_2BS_CA02DC5B2 Triticum aestivum Traes_2BS_CA02DC5B2 I 0.707
AtMYB19 Arabidopsis thaliana AT5G52260 I 0.707
Eucgr.K00555 Eucalyptus grandis Eucgr.K00555 I 0.706
chr1.CM0206.990.nd Lotus japonicus chr1.CM0206.990.nd I 0.706
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.705
cassava21326.m1 Manihot esculenta cassava21326.m1 I 0.705
ORUFI02G26980 Oryza rufipogon ORUFI02G26980 I 0.704
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.699
OB02G35920 Oryza brachyantha OB02G35920 I 0.699
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.699
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.699
Traes_2BL_604FE7639 Triticum aestivum Traes_2BL_604FE7639 I 0.698
BRADI5G16672 Brachypodium distachyon BRADI5G16672 I 0.698
Traes_2BL_03F3475CD Triticum aestivum Traes_2BL_03F3475CD I 0.698
Traes_2AL_962A9D448 Triticum aestivum Traes_2AL_962A9D448 I 0.698
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.697
F775_20725 Aegilops tauschii F775_20725 I 0.697
Sb06g023610 Sorghum bicolor Sb06g023610 I 0.695
GRMZM2G170049 Zea mays GRMZM2G170049 I 0.695
TRIUR3_14330 Triticum urartu TRIUR3_14330 I 0.695
F775_08647 Aegilops tauschii F775_08647 I 0.695
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I 0.695
BGIOSGA008698 Oryza indica BGIOSGA008698 I 0.695
F775_14744 Aegilops tauschii F775_14744 I 0.695
TRIUR3_32691 Triticum urartu TRIUR3_32691 I 0.695
Traes_6BL_CE61B9510 Triticum aestivum Traes_6BL_CE61B9510 I 0.695
Traes_6DL_8BAAC240D Triticum aestivum Traes_6DL_8BAAC240D I 0.695
Traes_6DL_A014E9069 Triticum aestivum Traes_6DL_A014E9069 I 0.695
Traes_6AL_C13753B31 Triticum aestivum Traes_6AL_C13753B31 I 0.695
Traes_6AL_D10CBA40D Triticum aestivum Traes_6AL_D10CBA40D I 0.695
MLOC_71418 Hordeum vulgare MLOC_71418 I 0.695
OBART02G25570 Oryza barthii OBART02G25570 I 0.695
OGLUM02G26100 Oryza glumaepatula OGLUM02G26100 I 0.695
ONIVA02G28010 Oryza nivara ONIVA02G28010 I 0.695
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.695
OMERI02G25080 Oryza meridionalis OMERI02G25080 I 0.695
OB02G32950 Oryza brachyantha OB02G32950 I 0.695
OPUNC02G23410 Oryza punctata OPUNC02G23410 I 0.695
Eucgr.A00996 Eucalyptus grandis Eucgr.A00996 I 0.692
GRMZM2G496770 Zea mays GRMZM2G496770 I 0.691
BRADI3G49970 Brachypodium distachyon BRADI3G49970 I 0.690
Si017947m.g Setaria italica Si017947m.g I 0.689
OB04G26810 Oryza brachyantha OB04G26810 I 0.689
Sb04g033680 Sorghum bicolor Sb04g033680 I 0.689
Pavir.Ab02417 Panicum virgatum Pavir.Ab02417 I 0.689
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.688
OBART04G23680 Oryza barthii OBART04G23680 I 0.688
Si010384m.g Setaria italica Si010384m.g I 0.688
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.688
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.688
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.688
Pavir.Ab02021 Panicum virgatum Pavir.Ab02021 I 0.688
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.688
Si017851m.g Setaria italica Si017851m.g I 0.688
Carubv10027541m.g Capsella rubella Carubv10027541m.g I 0.688
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.688
Cagra.0094s0035 Capsella grandiflora Cagra.0094s0035 I 0.688
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.688
OS04G0594100 Oryza sativa OS04G0594100 I 0.688
Sb04g024000 Sorghum bicolor Sb04g024000 I 0.688
LPERR04G16000 Leersia perrieri LPERR04G16000 I 0.686
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.684
GSMUA_Achr8G18730_001 Musa acuminata GSMUA_Achr8G18730_001 I 0.683
Traes_2AS_40FA27AE7 Triticum aestivum Traes_2AS_40FA27AE7 I 0.682
MLOC_56753 Hordeum vulgare MLOC_56753 I 0.682
e_gw1.211.99.1 Physcomitrella patens e_gw1.211.99.1 I 0.682
TRIUR3_26358 Triticum urartu TRIUR3_26358 I 0.682
F775_00835 Aegilops tauschii F775_00835 I 0.682
Pavir.J03230 Panicum virgatum Pavir.J03230 I 0.680
GRMZM2G147698 Zea mays GRMZM2G147698 I 0.680
Si036638m.g Setaria italica Si036638m.g I 0.680
GSMUA_Achr4G29410_001 Musa acuminata GSMUA_Achr4G29410_001 I 0.679
Gorai.013G088300 Gossypium raimondii Gorai.013G088300 I 0.678
VIT_01s0010g00410 Vitis vinifera VIT_01s0010g00410 I 0.678
Traes_2BL_34A0848F2 Triticum aestivum Traes_2BL_34A0848F2 I 0.678
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I 0.678
TRIUR3_15020 Triticum urartu TRIUR3_15020 I 0.677
Thhalv10010657m.g Eutrema salsugineum Thhalv10010657m.g I 0.677
Traes_2AL_2D4100475 Triticum aestivum Traes_2AL_2D4100475 I 0.677
Traes_2BL_7CEC6A8D7 Triticum aestivum Traes_2BL_7CEC6A8D7 I 0.677
Traes_2BL_35241DE8D Triticum aestivum Traes_2BL_35241DE8D I 0.677
MLOC_73614 Hordeum vulgare MLOC_73614 I 0.677
gene06920-v1.0-hybrid Fragaria vesca gene06920-v1.0-hybrid I 0.676
Bra018027 Brassica rapa Bra018027 I 0.676
VIT_05s0020g01100 Vitis vinifera VIT_05s0020g01100 I 0.676
mgf024107m Mimulus guttatus mgf024107m I 0.675
Ca_01055 Cicer arietinum Ca_01055 I 0.675
OPUNC04G17450 Oryza punctata OPUNC04G17450 I 0.673
BGIOSGA016820 Oryza indica BGIOSGA016820 I 0.673
ONIVA04G17950 Oryza nivara ONIVA04G17950 I 0.673
OBART04G19730 Oryza barthii OBART04G19730 I 0.673
ORUFI04G21270 Oryza rufipogon ORUFI04G21270 I 0.673
Si012304m.g Setaria italica Si012304m.g I 0.673
ORGLA10G0151700 Oryza glaberrima ORGLA10G0151700 I 0.673
ORGLA04G0168700 Oryza glaberrima ORGLA04G0168700 I 0.673
OGLUM04G19590 Oryza glumaepatula OGLUM04G19590 I 0.673
Pavir.Ga00879 Panicum virgatum Pavir.Ga00879 I 0.673
Pavir.Gb00734 Panicum virgatum Pavir.Gb00734 I 0.673
OS04G0532800 Oryza sativa OS04G0532800 I 0.673
OMERI04G16730 Oryza meridionalis OMERI04G16730 I 0.673
PDK_20s1606731g001 Phoenix dactylifera PDK_20s1606731g001 I 0.672
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.671
GRMZM2G172327 Zea mays GRMZM2G172327 I 0.670
OS07G0497500 Oryza sativa OS07G0497500 I 0.670
OPUNC07G13970 Oryza punctata OPUNC07G13970 I 0.670
Bo7g110400 Brassica oleracea Bo7g110400 N 0.670
Sb02g033830 Sorghum bicolor Sb02g033830 I 0.670
Bra019154 Brassica rapa Bra019154 N 0.670
ORUFI07G15620 Oryza rufipogon ORUFI07G15620 I 0.670
BGIOSGA024270 Oryza indica BGIOSGA024270 I 0.670
Bo1g040300 Brassica oleracea Bo1g040300 N 0.670
OMERI07G11910 Oryza meridionalis OMERI07G11910 I 0.670
ORGLA07G0124200 Oryza glaberrima ORGLA07G0124200 I 0.670
Pavir.Bb02786 Panicum virgatum Pavir.Bb02786 I 0.670
OBART07G15150 Oryza barthii OBART07G15150 I 0.670
LPERR07G12760 Leersia perrieri LPERR07G12760 I 0.670
Si030152m.g Setaria italica Si030152m.g I 0.670
Pavir.Ba00923 Panicum virgatum Pavir.Ba00923 I 0.670
PK08038.1 Cannabis sativa PK08038.1 I 0.669
Pavir.Ia01684 Panicum virgatum Pavir.Ia01684 I 0.668
Pavir.J09313 Panicum virgatum Pavir.J09313 I 0.668
Sb01g019270 Sorghum bicolor Sb01g019270 I 0.668
Si040527m.g Setaria italica Si040527m.g I 0.668
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.667
GLYMA20G22230 Glycine max GLYMA20G22230 I 0.667
Bo2g156300 Brassica oleracea Bo2g156300 I 0.667
Bo7g095130 Brassica oleracea Bo7g095130 I 0.667
GLYMA19G41250 Glycine max GLYMA19G41250 I 0.667
MYB55 Arabidopsis thaliana AT4G01680 D 0.667
Ca_03589 Cicer arietinum Ca_03589 I 0.667
Ca_01072 Cicer arietinum Ca_01072 I 0.667
MYB55 Arabidopsis lyrata fgenesh2_kg.6__3543__AT4G01680.1 I 0.667
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.667
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.667
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.667
Bostr.4825s0008 Boechera stricta Bostr.4825s0008 I 0.667
Carubv10001308m.g Capsella rubella Carubv10001308m.g I 0.667
MTR_1g085040 Medicago truncatula MTR_1g085040 I 0.667
Bra036317 Brassica rapa Bra036317 I 0.667
Eucgr.H01337 Eucalyptus grandis Eucgr.H01337 I 0.667
Bra036588 Brassica rapa Bra036588 I 0.667
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.667
GLYMA03G38660 Glycine max GLYMA03G38660 I 0.667
Cagra.0334s0011 Capsella grandiflora Cagra.0334s0011 I 0.667
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.667
Bo9g004210 Brassica oleracea Bo9g004210 I 0.667
Bo9g010860 Brassica oleracea Bo9g010860 I 0.667
MYB86 Arabidopsis thaliana AT5G26660 I 0.667
Cla005219 Citrullus lanatus Cla005219 I 0.666
Cla020303 Citrullus lanatus Cla020303 I 0.666
Cucsa.051050 Cucumis sativus Cucsa.051050 I 0.666
Cucsa.090310 Cucumis sativus Cucsa.090310 I 0.666
Gorai.013G088200 Gossypium raimondii Gorai.013G088200 I 0.666
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I 0.665
GRMZM2G097636 Zea mays GRMZM2G097636 I 0.664
GRMZM2G097638 Zea mays GRMZM2G097638 I 0.664
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I 0.663
BRADI3G28830 Brachypodium distachyon BRADI3G28830 I 0.663
gw1.149.61.1 Physcomitrella patens gw1.149.61.1 I 0.663
BRADI3G46910 Brachypodium distachyon BRADI3G46910 I 0.663
MTR_8g017440 Medicago truncatula MTR_8g017440 I 0.662
Lus10041145.g Linum usitatissimum Lus10041145.g I 0.662
Cla006288 Citrullus lanatus Cla006288 I 0.661