AtMYB45 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh1_pg.C_scaffold_5001377 T270677_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.701 0.677
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.701 0.677
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.701 0.677
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.673 0.656
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.673 0.656
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_5001377 Myb 20 67
fgenesh1_pg.C_scaffold_5001377 Myb 73 118

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AtMYB45 Arabidopsis thaliana AT3G48920 I 0.905
Bostr.18473s0062 Boechera stricta Bostr.18473s0062 I 0.860
Cagra.2337s0007 Capsella grandiflora Cagra.2337s0007 I 0.852
Carubv10018592m.g Capsella rubella Carubv10018592m.g I 0.852
Thhalv10010657m.g Eutrema salsugineum Thhalv10010657m.g I 0.842
Bo8g077360 Brassica oleracea Bo8g077360 I 0.812
Bra018027 Brassica rapa Bra018027 I 0.791
GLYMA20G29710 Glycine max GLYMA20G29710 I 0.788
GLYMA10G38110 Glycine max GLYMA10G38110 I 0.788
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.780
GLYMA09G25655 Glycine max GLYMA09G25655 I 0.770
MTR_1g100667 Medicago truncatula MTR_1g100667 I 0.762
chr5.CM0148.380.nc Lotus japonicus chr5.CM0148.380.nc I 0.759
TCM_015157 Theobroma cacao TCM_015157 I 0.756
Ca_19758 Cicer arietinum Ca_19758 I 0.751
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.748
SapurV1A.1253s0100 Salix purpurea SapurV1A.1253s0100 I 0.747
Eucgr.K00250 Eucalyptus grandis Eucgr.K00250 I 0.745
Solyc03g025870.2 Solanum lycopersicum Solyc03g025870.2 I 0.740
Pm019344 Prunus mume Pm019344 I 0.738
PRUPE_ppa019729mg Prunus persica PRUPE_ppa019729mg I 0.738
gene13281-v1.0-hybrid Fragaria vesca gene13281-v1.0-hybrid I 0.736
SapurV1A.0754s0180 Salix purpurea SapurV1A.0754s0180 I 0.736
GSMUA_Achr1G25120_001 Musa acuminata GSMUA_Achr1G25120_001 I 0.733
MDP0000152575 Malus domestica MDP0000152575 I 0.733
GLYMA19G41010 Glycine max GLYMA19G41010 I 0.731
PK18276.1 Cannabis sativa PK18276.1 I 0.731
evm.TU.supercontig_107.47 Carica papaya evm.TU.supercontig_107.47 I 0.731
POPTR_0015s13190 Populus trichocarpa POPTR_0015s13190 I 0.730
Gorai.008G277900 Gossypium raimondii Gorai.008G277900 I 0.726
GSMUA_Achr2G07930_001 Musa acuminata GSMUA_Achr2G07930_001 I 0.724
POPTR_0014s10680 Populus trichocarpa POPTR_0014s10680 I 0.722
MTR_7g110830 Medicago truncatula MTR_7g110830 I 0.722
GLYMA03G38410 Glycine max GLYMA03G38410 I 0.722
GLYMA02G00960 Glycine max GLYMA02G00960 I 0.722
GLYMA10G27940 Glycine max GLYMA10G27940 I 0.722
POPTR_0002s18700 Populus trichocarpa POPTR_0002s18700 I 0.722
TCM_004965 Theobroma cacao TCM_004965 I 0.722
Ciclev10020144m.g Citrus clementina Ciclev10020144m.g I 0.722
MTR_1g085640 Medicago truncatula MTR_1g085640 I 0.722
Gorai.008G133700 Gossypium raimondii Gorai.008G133700 I 0.722
Gorai.007G118200 Gossypium raimondii Gorai.007G118200 I 0.722
Gorai.004G147600 Gossypium raimondii Gorai.004G147600 I 0.722
chr5.CM0048.320.nd Lotus japonicus chr5.CM0048.320.nd I 0.722
Gorai.001G148500 Gossypium raimondii Gorai.001G148500 I 0.722
Ca_03564 Cicer arietinum Ca_03564 I 0.722
cassava33008.m1 Manihot esculenta cassava33008.m1 I 0.722
Lus10038022.g Linum usitatissimum Lus10038022.g I 0.722
VIT_07s0005g02480 Vitis vinifera VIT_07s0005g02480 I 0.722
SapurV1A.0321s0070 Salix purpurea SapurV1A.0321s0070 I 0.722
orange1.1g013300m.g Citrus sinensis orange1.1g013300m.g I 0.722
SapurV1A.3474s0020 Salix purpurea SapurV1A.3474s0020 I 0.722
MDP0000896053 Malus domestica MDP0000896053 I 0.718
cassava26284.m1 Manihot esculenta cassava26284.m1 I 0.717
PGSC0003DMG400014291 Solanum tuberosum PGSC0003DMG400014291 I 0.716
OGLUM07G23470 Oryza glumaepatula OGLUM07G23470 I 0.714
ORGLA07G0264800 Oryza glaberrima ORGLA07G0264800 I 0.714
OPUNC07G22080 Oryza punctata OPUNC07G22080 I 0.714
OMERI03G17220 Oryza meridionalis OMERI03G17220 I 0.714
OMERI07G19830 Oryza meridionalis OMERI07G19830 I 0.714
ORUFI07G24600 Oryza rufipogon ORUFI07G24600 I 0.714
BGIOSGA010658 Oryza indica BGIOSGA010658 I 0.714
BGIOSGA026208 Oryza indica BGIOSGA026208 I 0.714
ONIVA02G07540 Oryza nivara ONIVA02G07540 I 0.714
LPERR07G20400 Leersia perrieri LPERR07G20400 I 0.714
Si029872m.g Setaria italica Si029872m.g I 0.714
GLYMA10G28250 Glycine max GLYMA10G28250 I 0.713
GSMUA_Achr5G18400_001 Musa acuminata GSMUA_Achr5G18400_001 I 0.712
AMTR_s00045p00146180 Amborella trichopoda AMTR_s00045p00146180 I 0.712
GSMUA_Achr2G18440_001 Musa acuminata GSMUA_Achr2G18440_001 I 0.712
GSMUA_Achr11G15910_001 Musa acuminata GSMUA_Achr11G15910_001 I 0.712
GSMUA_Achr11G00430_001 Musa acuminata GSMUA_Achr11G00430_001 I 0.712
Aquca_003_00245 Aquilegia coerulea Aquca_003_00245 I 0.712
PGSC0003DMG400018279 Solanum tuberosum PGSC0003DMG400018279 I 0.711
Solyc01g102340.2 Solanum lycopersicum Solyc01g102340.2 I 0.711
Cla001724 Citrullus lanatus Cla001724 I 0.710
Traes_1DS_5BAD8947E Triticum aestivum Traes_1DS_5BAD8947E I 0.708
F775_28584 Aegilops tauschii F775_28584 I 0.708
Traes_1BS_92EA1F290 Triticum aestivum Traes_1BS_92EA1F290 I 0.708
Traes_1AS_1EE692FDC Triticum aestivum Traes_1AS_1EE692FDC I 0.708
MLOC_59663 Hordeum vulgare MLOC_59663 I 0.708
BRADI2G36730 Brachypodium distachyon BRADI2G36730 I 0.708
chr5.CM0048.130.nc Lotus japonicus chr5.CM0048.130.nc I 0.707
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I 0.706
GSMUA_Achr3G12200_001 Musa acuminata GSMUA_Achr3G12200_001 I 0.705
Sb02g040480 Sorghum bicolor Sb02g040480 I 0.705
GRMZM2G150841 Zea mays GRMZM2G150841 I 0.705
ONIVA05G02580 Oryza nivara ONIVA05G02580 I 0.703
ORGLA05G0025500 Oryza glaberrima ORGLA05G0025500 I 0.703
ORGLA01G0100400 Oryza glaberrima ORGLA01G0100400 I 0.703
VIT_14s0060g00240 Vitis vinifera VIT_14s0060g00240 I 0.703
OPUNC05G02540 Oryza punctata OPUNC05G02540 I 0.703
OPUNC01G11600 Oryza punctata OPUNC01G11600 I 0.703
OS01G0285300 Oryza sativa OS01G0285300 I 0.703
OS05G0140100 Oryza sativa OS05G0140100 I 0.703
Sb09g003100 Sorghum bicolor Sb09g003100 I 0.703
Si001565m.g Setaria italica Si001565m.g I 0.703
Eucgr.B02197 Eucalyptus grandis Eucgr.B02197 I 0.703
Si022113m.g Setaria italica Si022113m.g I 0.703
ORUFI05G02790 Oryza rufipogon ORUFI05G02790 I 0.703
mgf003709m Mimulus guttatus mgf003709m I 0.703
Sb03g011640 Sorghum bicolor Sb03g011640 I 0.703
ORUFI01G12800 Oryza rufipogon ORUFI01G12800 I 0.703
OLONG_008768 Oryza longistaminata OLONG_008768 I 0.703
Pavir.Eb01178 Panicum virgatum Pavir.Eb01178 I 0.703
GSMUA_Achr3G24580_001 Musa acuminata GSMUA_Achr3G24580_001 I 0.703
Pavir.Ea01054 Panicum virgatum Pavir.Ea01054 I 0.703
LPERR01G10930 Leersia perrieri LPERR01G10930 I 0.703
LPERR05G02400 Leersia perrieri LPERR05G02400 I 0.703
GRMZM2G171781 Zea mays GRMZM2G171781 I 0.703
GRMZM2G127490 Zea mays GRMZM2G127490 I 0.703
BGIOSGA001872 Oryza indica BGIOSGA001872 I 0.703
BGIOSGA019160 Oryza indica BGIOSGA019160 I 0.703
Pavir.J31344 Panicum virgatum Pavir.J31344 I 0.703
GRMZM2G017520 Zea mays GRMZM2G017520 I 0.703
OB01G21720 Oryza brachyantha OB01G21720 I 0.703
Pavir.J40848 Panicum virgatum Pavir.J40848 I 0.703
OLONG_014417 Oryza longistaminata OLONG_014417 I 0.703
OBART05G02690 Oryza barthii OBART05G02690 I 0.703
OGLUM01G13340 Oryza glumaepatula OGLUM01G13340 I 0.703
OGLUM05G02680 Oryza glumaepatula OGLUM05G02680 I 0.703
OBART01G11910 Oryza barthii OBART01G11910 I 0.703
OB05G12630 Oryza brachyantha OB05G12630 I 0.703
ONIVA01G14120 Oryza nivara ONIVA01G14120 I 0.703
OMERI05G02610 Oryza meridionalis OMERI05G02610 I 0.703
Solyc10g044680.1 Solanum lycopersicum Solyc10g044680.1 I 0.702
gw1.149.61.1 Physcomitrella patens gw1.149.61.1 I 0.702
MYB55 Arabidopsis thaliana AT4G01680 D 0.701
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.701
Bostr.4825s0008 Boechera stricta Bostr.4825s0008 I 0.701
Cagra.0334s0011 Capsella grandiflora Cagra.0334s0011 I 0.701
Carubv10001308m.g Capsella rubella Carubv10001308m.g I 0.701
Bo9g004210 Brassica oleracea Bo9g004210 I 0.701
Bra036317 Brassica rapa Bra036317 I 0.701
MYB55 Arabidopsis lyrata fgenesh2_kg.6__3543__AT4G01680.1 I 0.701
Lus10039213.g Linum usitatissimum Lus10039213.g I 0.700
Eucgr.A00996 Eucalyptus grandis Eucgr.A00996 I 0.700
Lus10027458.g Linum usitatissimum Lus10027458.g I 0.699
GSMUA_Achr8G18730_001 Musa acuminata GSMUA_Achr8G18730_001 I 0.699
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I 0.695
OPUNC03G17950 Oryza punctata OPUNC03G17950 I 0.694
PDK_20s1606731g001 Phoenix dactylifera PDK_20s1606731g001 I 0.694
Ca_01072 Cicer arietinum Ca_01072 I 0.692
Carubv10027541m.g Capsella rubella Carubv10027541m.g I 0.692
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.692
SapurV1A.1077s0040 Salix purpurea SapurV1A.1077s0040 I 0.692
chr1.CM0122.20.nc Lotus japonicus chr1.CM0122.20.nc I 0.692
Ca_03589 Cicer arietinum Ca_03589 I 0.692
Cagra.0094s0035 Capsella grandiflora Cagra.0094s0035 I 0.692
Ca_01055 Cicer arietinum Ca_01055 I 0.692
GLYMA19G41250 Glycine max GLYMA19G41250 I 0.692
GLYMA03G38660 Glycine max GLYMA03G38660 I 0.692
MTR_1g085040 Medicago truncatula MTR_1g085040 I 0.692
GLYMA20G22230 Glycine max GLYMA20G22230 I 0.692
PGSC0003DMG400015767 Solanum tuberosum PGSC0003DMG400015767 I 0.691
fgenesh1_pg.scaffold_189000016 Physcomitrella patens fgenesh1_pg.scaffold_189000016 I 0.691
e_gw1.24.66.1 Physcomitrella patens e_gw1.24.66.1 I 0.691
BRADI2G11080 Brachypodium distachyon BRADI2G11080 I 0.691
AMTR_s00079p00143780 Amborella trichopoda AMTR_s00079p00143780 I 0.689
GSMUA_Achr4G19560_001 Musa acuminata GSMUA_Achr4G19560_001 I 0.685
MLOC_37780 Hordeum vulgare MLOC_37780 I 0.684
Si036638m.g Setaria italica Si036638m.g I 0.684
Traes_7DL_AD4395F8F Triticum aestivum Traes_7DL_AD4395F8F I 0.684
Pavir.J03230 Panicum virgatum Pavir.J03230 I 0.684
Traes_7AL_0BCF482E8 Triticum aestivum Traes_7AL_0BCF482E8 I 0.684
GRMZM2G147698 Zea mays GRMZM2G147698 I 0.684
TRIUR3_20789 Triticum urartu TRIUR3_20789 I 0.684
F775_18488 Aegilops tauschii F775_18488 I 0.684
mgf024107m Mimulus guttatus mgf024107m I 0.683
GSMUA_Achr2G01830_001 Musa acuminata GSMUA_Achr2G01830_001 I 0.683
PK03176.1 Cannabis sativa PK03176.1 I 0.682
cassava17679.valid.m1 Manihot esculenta cassava17679.valid.m1 I 0.682
evm.TU.supercontig_57.32 Carica papaya evm.TU.supercontig_57.32 I 0.682
MDP0000601420 Malus domestica MDP0000601420 I 0.682
GSMUA_AchrUn_randomG00040_001 Musa acuminata GSMUA_AchrUn_randomG00040_001 I 0.682
MDP0000653903 Malus domestica MDP0000653903 I 0.682
Cla005219 Citrullus lanatus Cla005219 I 0.682
TCM_026853 Theobroma cacao TCM_026853 I 0.682
MDP0000932804 Malus domestica MDP0000932804 I 0.682
Cucsa.051050 Cucumis sativus Cucsa.051050 I 0.682
gene22961-v1.0-hybrid Fragaria vesca gene22961-v1.0-hybrid I 0.682
cassava12868.valid.m1 Manihot esculenta cassava12868.valid.m1 I 0.682
Bostr.30057s0004 Boechera stricta Bostr.30057s0004 I 0.680
Bo7g110400 Brassica oleracea Bo7g110400 N 0.680
Bra019154 Brassica rapa Bra019154 N 0.680
SELMODRAFT_437219 Selaginella moellendorffii SELMODRAFT_437219 I 0.678
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.678
Bra020016 Brassica rapa Bra020016 I 0.677
Bo8g111090 Brassica oleracea Bo8g111090 I 0.677
Bra031669 Brassica rapa Bra031669 I 0.677
Thhalv10023601m.g Eutrema salsugineum Thhalv10023601m.g I 0.676
AtMYB50 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003728 I 0.676
AtMYB50 Arabidopsis thaliana AT1G57560 I 0.676
GSMUA_Achr1G18990_001 Musa acuminata GSMUA_Achr1G18990_001 I 0.675
Thhalv10008000m.g Eutrema salsugineum Thhalv10008000m.g I 0.673
Carubv10009497m.g Capsella rubella Carubv10009497m.g I 0.673
PRUPE_ppa019718mg Prunus persica PRUPE_ppa019718mg I 0.673
Pm003267 Prunus mume Pm003267 I 0.673
mgf024114m Mimulus guttatus mgf024114m I 0.673
MYB61 Arabidopsis lyrata scaffold_100991.1 I 0.673
MYB61 Arabidopsis thaliana AT1G09540 D 0.673
Bra030783 Brassica rapa Bra030783 I 0.673
GSMUA_Achr7G17250_001 Musa acuminata GSMUA_Achr7G17250_001 I 0.673
Bostr.25494s0012 Boechera stricta Bostr.25494s0012 I 0.673
GSMUA_Achr8G11340_001 Musa acuminata GSMUA_Achr8G11340_001 I 0.673
Cagra.4395s0139 Capsella grandiflora Cagra.4395s0139 I 0.673
Bo3g023270 Brassica oleracea Bo3g023270 I 0.672
AMTR_s00083p00123850 Amborella trichopoda AMTR_s00083p00123850 I 0.672
Thhalv10014388m.g Eutrema salsugineum Thhalv10014388m.g I 0.672
Carubv10007732m.g Capsella rubella Carubv10007732m.g I 0.672
Cagra.23907s0010 Capsella grandiflora Cagra.23907s0010 I 0.672
AtMYB19 Arabidopsis thaliana AT5G52260 I 0.672
Bostr.7867s0367 Boechera stricta Bostr.7867s0367 I 0.672
LAF1 Arabidopsis thaliana AT4G25560 I 0.672
Bostr.7305s0041 Boechera stricta Bostr.7305s0041 I 0.672
AtMYB19 Arabidopsis lyrata fgenesh2_kg.8__1111__AT5G52260.1 I 0.672
AtMYB18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001401 I 0.672
cassava21326.m1 Manihot esculenta cassava21326.m1 I 0.672
Bra029129 Brassica rapa Bra029129 I 0.672
POPTR_0005s00340 Populus trichocarpa POPTR_0005s00340 I 0.671
gw1.277.32.1 Physcomitrella patens gw1.277.32.1 I 0.671
Cucsa.313950 Cucumis sativus Cucsa.313950 I 0.669
Bra013900 Brassica rapa Bra013900 N 0.668
Bo1g040300 Brassica oleracea Bo1g040300 N 0.667
BRADI1G61397 Brachypodium distachyon BRADI1G61397 I 0.666
LPERR03G16350 Leersia perrieri LPERR03G16350 I 0.666
ORGLA03G0178400 Oryza glaberrima ORGLA03G0178400 I 0.666
ONIVA04G28760 Oryza nivara ONIVA04G28760 I 0.666
OGLUM03G19500 Oryza glumaepatula OGLUM03G19500 I 0.666
OS03G0371800 Oryza sativa OS03G0371800 I 0.666
GSMUA_Achr6G35800_001 Musa acuminata GSMUA_Achr6G35800_001 I 0.665
SapurV1A.0264s0440 Salix purpurea SapurV1A.0264s0440 I 0.665
Pavir.Ga00879 Panicum virgatum Pavir.Ga00879 I 0.665
Pavir.Gb00734 Panicum virgatum Pavir.Gb00734 I 0.665
Sb06g023610 Sorghum bicolor Sb06g023610 I 0.665
Si012304m.g Setaria italica Si012304m.g I 0.665
MDP0000263595 Malus domestica MDP0000263595 I 0.664
TCM_016552 Theobroma cacao TCM_016552 I 0.664
AMTR_s00036p00107460 Amborella trichopoda AMTR_s00036p00107460 I 0.663
GSMUA_Achr8G03510_001 Musa acuminata GSMUA_Achr8G03510_001 I 0.663
Eucgr.H01337 Eucalyptus grandis Eucgr.H01337 I 0.662
Bo7g095130 Brassica oleracea Bo7g095130 I 0.662
Bo2g156300 Brassica oleracea Bo2g156300 I 0.662
MYB86 Arabidopsis thaliana AT5G26660 I 0.662
chr1.CM0206.990.nd Lotus japonicus chr1.CM0206.990.nd I 0.662
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.662
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.662
Eucgr.K00555 Eucalyptus grandis Eucgr.K00555 I 0.662
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.662
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.662
SapurV1A.1016s0030 Salix purpurea SapurV1A.1016s0030 I 0.662
Bra036588 Brassica rapa Bra036588 I 0.662
SapurV1A.1387s0090 Salix purpurea SapurV1A.1387s0090 I 0.662
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.662
Bo9g010860 Brassica oleracea Bo9g010860 I 0.662
orange1.1g014135m.g Citrus sinensis orange1.1g014135m.g I 0.661
orange1.1g045400m.g Citrus sinensis orange1.1g045400m.g I 0.661